RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NMBP08949 121 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 PIPP12273 146 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 JUPP14923 745 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 RAB13P51153 203 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ARSDP51689 593 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ACLYP53396 1101 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 DCDC1P59894 354 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 CDC42P60953 191 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 PURAQ00577 322 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 ZNF33AQ06730 810 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 FGL1Q08830 312 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 SCAPQ12770 1279 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 LRIF1Q5T3J3 769 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 C3P1Q6ZMU1 363 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 UNC93AQ86WB7 457 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 FAM9CQ8IZT9 166 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 FTMTQ8N4E7 242 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 OR6B3Q8NGW1 331 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 TMEM163Q8TC26 289 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ZNF668Q96K58 619 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 PPP3R2Q96LZ3 170 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 KCTD7Q96MP8 289 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 H2AFJQ9BTM1 129 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 MED18Q9BUE0 208 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 KATNB1Q9BVA0 655 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 MND1Q9BWT6 205 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 RERGLQ9H628 205 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 CLMPQ9H6B4 373 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 TDRD3Q9H7E2 651 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 CLN6Q9NWW5 311 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 KLHL42Q9P2K6 505 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 NDRG3Q9UGV2 375 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 CLEC2DQ9UHP7 191 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 SCP2D1Q9UJQ7 156 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 FOXD3Q9UJU5 478 aaPredicted RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 PURGQ9UJV8 347 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 FBXL2Q9UKC9 423 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 EXO1Q9UQ84 846 aaKnown RBP8.26□□□□□ -1.09
LSM5-208ENST00000450169 KCNK7Q9Y2U2 307 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 ASB1Q9Y576 335 aa8.26□□□□□ -1.09
LSM5-208ENST00000450169 MEIKINA0A087WXM9 373 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 LCHNA4D1U4 455 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 NPEPPSL1A6NEC2 478 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 HCRTO43612 131 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 ADRB1P08588 477 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 HBQ1P09105 142 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 ODC1P11926 461 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 RHCEP18577 417 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 C4BPBP20851 252 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 KDELR2P33947 212 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 EVX1P49640 407 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 STK19P49842 368 aaPredicted RBP8.25□□□□□ -1.09
LSM5-208ENST00000450169 ARHGDIBP52566 201 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 RPS7P62081 194 aaKnown RBP8.25□□□□□ -1.09
LSM5-208ENST00000450169 DSC1Q08554 894 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
LSM5-208ENST00000450169 SLC14A1Q13336 389 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 PPIGQ13427 754 aaKnown RBP eCLIP8.25□□□□□ -1.093e-8■□□□□ 9.9
LSM5-208ENST00000450169 OPCMLQ14982 345 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 ABRAXAS2Q15018 415 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 TEAD4Q15561 434 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 FAM187BQ17R55 369 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 TTLL9Q3SXZ7 439 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 PDE12Q6L8Q7 609 aaKnown RBP8.25□□□□□ -1.09
LSM5-208ENST00000450169 SLC27A4Q6P1M0 643 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 OTOP2Q7RTS6 562 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 ZNF551Q7Z340 670 aaPredicted RBP8.25□□□□□ -1.09
LSM5-208ENST00000450169 ATPAF2Q8N5M1 289 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 OR10G2Q8NGC3 310 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 NSMAFQ92636 917 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 TMEM203Q969S6 136 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 TPD52L3Q96J77 140 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 OR2M2Q96R28 347 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 NELL2Q99435 816 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 MRIQ9BWK5 157 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 HDHD2Q9H0R4 259 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 KCNH6Q9H252 994 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 SYNDIG1Q9H7V2 258 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 BIN3Q9NQY0 253 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 DLL4Q9NR61 685 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 NRBP2Q9NSY0 501 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 RLIMQ9NVW2 624 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 POMT2Q9UKY4 750 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 SPATA2Q9UM82 520 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 TNFSF13BQ9Y275 285 aa8.25□□□□□ -1.09
LSM5-208ENST00000450169 LOC285095A0A1B0GVY8 99 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 TNFRSF11BO00300 401 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 GPR171O14626 319 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 GABRDO14764 452 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 GATCO43716 136 aaKnown RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 KLK8O60259 260 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 MPZL2O60487 215 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 RGS11O94810 467 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 TOXO94900 526 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 HLA-DQB2P05538 268 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 ANXA8P13928 327 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 LCN1P31025 176 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 HSPA7P48741 367 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 HNMTP50135 292 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 WNT3AP56704 352 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms