RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TXNL4BQ9NX01 149 aaKnown RBP18.38■□□□□ 0.53
HMGA1-205ENST00000447654 TAS2R16Q9NYV7 291 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 PFDN2Q9UHV9 154 aa18.38■□□□□ 0.53
HMGA1-205ENST00000447654 E2F3O00716 465 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ADAMDEC1O15204 470 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 RNGTTO60942 597 aaKnown RBP18.37■□□□□ 0.53
HMGA1-205ENST00000447654 PCSK1P29120 753 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ERVPABLB-1P60509 514 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ACVR1Q04771 509 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 MBTPS1Q14703 1052 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 GRM7Q14831 915 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 Q6ZPB1 254 aaPredicted RBP18.37■□□□□ 0.53
HMGA1-205ENST00000447654 FAM92BQ6ZTR7 304 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 MSANTD1Q6ZTZ1 278 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 NKAPQ8N5F7 415 aaKnown RBP18.37■□□□□ 0.53
HMGA1-205ENST00000447654 IL17RCQ8NAC3 791 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 OR4D10Q8NGI6 311 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 OR10Q1Q8NGQ4 319 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 COQ10AQ96MF6 247 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 KCTD7Q96MP8 289 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 MAPKAP1Q9BPZ7 522 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ACBD6Q9BR61 282 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 TKTL2Q9H0I9 626 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 NDRG3Q9UGV2 375 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 PADI2Q9Y2J8 665 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 LAMA3Q16787 3333 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 NLRC5Q86WI3 1866 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 MEIKINA0A087WXM9 373 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 M0QZQ0 153 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 RGS14O43566 566 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 DIRAS1O95057 198 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 OR4Q2P0C623 313 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 EVX1P49640 407 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 HK3P52790 923 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ACLYP53396 1101 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 C1DQ13901 141 aaKnown RBP18.37■□□□□ 0.53
HMGA1-205ENST00000447654 C3orf38Q5JPI3 329 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 CNIH2Q6PI25 160 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 RNF180Q86T96 592 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ZNF280BQ86YH2 543 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 FAM9CQ8IZT9 166 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 PROKR2Q8NFJ6 384 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 SH3RF2Q8TEC5 729 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 OTUB1Q96FW1 271 aaPredicted RBP18.37■□□□□ 0.53
HMGA1-205ENST00000447654 SEC22CQ9BRL7 303 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 FZD3Q9NPG1 666 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 CRYL1Q9Y2S2 319 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 CCL27Q9Y4X3 112 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 PTPRDP23468 1912 aa18.37■□□□□ 0.53
HMGA1-205ENST00000447654 ISM1B1AKI9 464 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 DNASE2O00115 360 aaPredicted RBP18.36■□□□□ 0.53
HMGA1-205ENST00000447654 AP2A2O94973 939 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 SRCP12931 536 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 CTPS1P17812 591 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 DNASE1P24855 282 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 CXCR3P49682 368 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 WNT3AP56704 352 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 VMACQ2NL98 169 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 GTDC1Q4AE62 458 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 HACD4Q5VWC8 232 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 RASSF6Q6ZTQ3 369 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 C7orf34Q96L11 122 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 FEVQ99581 238 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 GKN1Q9NS71 199 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 MARCH4Q9P2E8 410 aaPredicted RBP18.36■□□□□ 0.53
HMGA1-205ENST00000447654 OR12D3Q9UGF7 316 aa18.36■□□□□ 0.53
HMGA1-205ENST00000447654 COL4A4P53420 1690 aaPredicted RBP18.36■□□□□ 0.53
HMGA1-205ENST00000447654 SLC28A1O00337 649 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 CSO75390 466 aaKnown RBP18.35■□□□□ 0.53
HMGA1-205ENST00000447654 GLP2RO95838 553 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 CFDP00746 253 aaPredicted RBP18.35■□□□□ 0.53
HMGA1-205ENST00000447654 SSTR4P31391 388 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 STK19P49842 368 aaPredicted RBP18.35■□□□□ 0.53
HMGA1-205ENST00000447654 CSTF1Q05048 431 aaKnown RBP18.35■□□□□ 0.53
HMGA1-205ENST00000447654 TUSC3Q13454 348 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 SLC39A12Q504Y0 691 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 CHMP1BQ7LBR1 199 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 TMEM151BQ8IW70 566 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 RAET1EQ8TD07 263 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 SLC38A2Q96QD8 506 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 WDCPQ9H6R7 721 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 B3GAT2Q9NPZ5 323 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 SERHLQ9NQF3 203 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 CD274Q9NZQ7 290 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 HCN3Q9P1Z3 774 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 GAAP10253 952 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 SOX3P41225 446 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 TGM4P49221 684 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 RAG2P55895 527 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 ADAM15Q13444 863 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 CDH18Q13634 790 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 VEZF1Q14119 521 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 ARTNQ5T4W7 220 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 OVOS1Q6IE37 1185 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 OR10G2Q8NGC3 310 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 LINC01599Q8WXQ3 324 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 RBCK1Q9BYM8 510 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 OR51J1Q9H342 316 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 SLC25A19Q9HC21 320 aa18.35■□□□□ 0.53
HMGA1-205ENST00000447654 TAS2R13Q9NYV9 303 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms