RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 MMACHCQ9Y4U1 282 aa6.54□□□□□ -1.36
LRRC28-203ENST00000447360 HEATR5BQ9P2D3 2071 aa6.54□□□□□ -1.36
LRRC28-203ENST00000447360 SH3D21A4FU49 640 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 SYNDIG1LA6NDD5 238 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 MBD3L4A6NDZ8 208 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 MBD3L5A6NJ08 208 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 A8MUA0 341 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 EEF1E1-BLOC1S5C9J1V9 151 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 E7EVH7 732 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 GFYI3L273 518 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PFDN6O15212 129 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NDUFS4O43181 175 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 EEF1E1O43324 174 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 ZBTB14O43829 449 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PRKNO60260 465 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NIPSNAP2O75323 286 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 AVILO75366 819 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 SYF2O95926 243 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 P04436 131 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 RPLP1P05386 114 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 RNH1P13489 461 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 CTSSP25774 331 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NMBRP28336 390 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 IMPA1P29218 277 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 FMO4P31512 558 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 SOX3P41225 446 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 MAGEA6P43360 314 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NPY2RP49146 381 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 DNASE1L1P49184 302 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 SESN2P58004 480 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 OLR1P78380 273 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 CRADDP78560 199 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TBL3Q12788 808 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 HYAL2Q12891 473 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 KCNJ11Q14654 390 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TRIP13Q15645 432 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 ACKR1Q16570 336 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 CYP1B1Q16678 543 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 ZNF750Q32MQ0 723 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TTLL9Q3SXZ7 439 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 HECTD2Q5U5R9 776 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 ANKRD22Q5VYY1 191 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NSUN5P2Q63ZY6 315 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 C4orf22Q6V702 233 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 HSDL2Q6YN16 418 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 ABHD13Q7L211 337 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 GSTA5Q7RTV2 222 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 STRA8Q7Z7C7 330 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 SDCCAG8Q86SQ7 713 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 CAND1Q86VP6 1230 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 C17orf64Q86WR6 236 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 HIPK1Q86Z02 1210 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PM20D2Q8IYS1 436 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 LPGAT1Q92604 370 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NCLNQ969V3 563 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NTNG2Q96CW9 530 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PERPQ96FX8 193 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PDLIM2Q96JY6 352 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PBKQ96KB5 322 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 SCYL1Q96KG9 808 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 CAPZA3Q96KX2 299 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TCF12Q99081 682 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 CCL19Q99731 98 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 KIFC1Q9BW19 673 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 EPB41L4BQ9H329 900 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 PNO1Q9NRX1 252 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 HOMER3Q9NSC5 361 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TREX1Q9NSU2 369 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TRMT1Q9NXH9 659 aaKnown RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TUBA8Q9NY65 449 aaPredicted RBP6.53□□□□□ -1.36
LRRC28-203ENST00000447360 KLHL42Q9P2K6 505 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NDRG3Q9UGV2 375 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 ATG4BQ9Y4P1 393 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 NPFFR2Q9Y5X5 522 aa6.53□□□□□ -1.36
LRRC28-203ENST00000447360 TLDC2A0PJX2 215 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 URADA6NGE7 173 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 CD8B2A6NJW9 211 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 E5RI56 91 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 WWP2O00308 870 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 ZSCAN12O43309 604 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 NRDCO43847 1150 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 KRT14P02533 472 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 ENO3P13929 434 aaPredicted RBP6.52□□□□□ -1.37
LRRC28-203ENST00000447360 PAX1P15863 534 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 TPSB2P20231 275 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 CCND1P24385 295 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 MGAT1P26572 445 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 ARNTP27540 789 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 CLCN7P51798 805 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 TERF1P54274 439 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 HSD17B7P56937 341 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 TBPL1P62380 186 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 BASP1P80723 227 aaKnown RBP6.52□□□□□ -1.37
LRRC28-203ENST00000447360 CDK16Q00536 496 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 RGS1Q08116 209 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 DMTNQ08495 405 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 TPSAB1Q15661 275 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 PHKG1Q16816 387 aa6.52□□□□□ -1.37
LRRC28-203ENST00000447360 MRNIPQ6NTE8 343 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms