RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ZNF680Q8NEM1 530 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 DPYSL5Q9BPU6 564 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 CES4AQ5XG92 561 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FNIP2Q9P278 1114 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SPACA6W5XKT8 324 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 NAP1L6A6NFF2 107 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 CELP19835 753 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FIZ1Q96SL8 496 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SAGP10523 405 aaPredicted RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 CHRNA5P30532 468 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ZNF33AQ06730 810 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 MFSD14CQ5VZR4 134 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FBXL3Q9UKT7 428 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FGF4P08620 206 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SREBF2Q12772 1141 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 GNPDA2Q8TDQ7 276 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 HASPINQ8TF76 798 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SLC5A11Q8WWX8 675 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 ARNTL2Q8WYA1 636 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 GMEB2Q9UKD1 530 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 TCTE3Q8IZS6 198 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 OR2T11Q8NH01 316 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 NPLOC4Q8TAT6 608 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FERD3LQ96RJ6 166 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 SECISBP2Q96T21 854 aaKnown RBP7.58□□□□□ -1.2
SMG1-202ENST00000446231 SLC23A1Q9UHI7 598 aa7.58□□□□□ -1.2
SMG1-202ENST00000446231 FMO6PO60774 539 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 BCKDHAP12694 445 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ARRB2P32121 409 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TOR2AQ5JU69 321 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SLC9B2Q86UD5 537 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 CDKN2AIPNLQ96HQ2 116 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 FCRL1Q96LA6 429 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 P2RY13Q9BPV8 354 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SPATA31A5Q5VU36 1347 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SPATA31A7Q8IWB4 1347 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR1G1P47890 313 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SLC10A7Q0GE19 358 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TAS1R3Q7RTX0 852 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PLEKHH3Q7Z736 793 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SLC9A6Q92581 669 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 GSX2Q9BZM3 304 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 POPDC3Q9HBV1 291 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 COPS3Q9UNS2 423 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 BAZ2AQ9UIF9 1905 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 A0A1B0GVM2 712 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 DPP6P42658 865 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 RPS25P62851 125 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 CAMK2BQ13554 666 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 DNAJB3Q8WWF6 145 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ARSAP15289 507 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 WEE1P30291 646 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 CNR2P34972 360 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ALDOCP09972 364 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 MAOBP27338 520 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PSMD8P48556 350 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR8S1Q8NH09 359 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR4C6Q8NH72 309 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR56B4Q8NH76 319 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 AMBRA1Q9C0C7 1298 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 SARDHQ9UL12 918 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 POM121CA8CG34 1229 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ALPIP09923 528 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ZNF425Q6IV72 752 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR2L5Q8NG80 312 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 BTN2A3PQ96KV6 586 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 MRGPRX2Q96LB1 330 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 LURAP1Q96LR2 239 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 DCLRE1CQ96SD1 692 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 KIF25Q9UIL4 384 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PCDHB11Q9Y5F2 797 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 NCR1O76036 304 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 LAMP1P11279 417 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 BTG1P62324 171 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 E2F1Q01094 437 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 DUSP7Q16829 419 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 IQCHQ86VS3 1027 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 ZNF366Q8N895 744 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 DYNC2LI1Q8TCX1 351 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 TMEM174Q8WUU8 243 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 MAL2Q969L2 176 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 EXOSC8Q96B26 276 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR4K3Q96R72 315 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 LOC285095A0A1B0GVY8 99 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 STMND1H3BQB6 276 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 HPGDP15428 266 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 GDF5P43026 501 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 CLDN8P56748 225 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OPCMLQ14982 345 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 CDONQ4KMG0 1287 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 DNASE1L2Q92874 299 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 C3orf49Q96BT1 292 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 MBOAT4Q96T53 435 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 QRSL1Q9H0R6 528 aaKnown RBP7.57□□□□□ -1.2
SMG1-202ENST00000446231 PRAF2O60831 178 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 PTHP01270 115 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 OR1E2P47887 323 aa7.57□□□□□ -1.2
SMG1-202ENST00000446231 APLP1P51693 650 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms