RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CHMP1BQ7LBR1 199 aa10.15□□□□□ -0.78
TOP3B-210ENST00000444502 CHERPQ8IWX8 916 aaKnown RBP10.15□□□□□ -0.78
TOP3B-210ENST00000444502 SVOPQ8N4V2 548 aa10.15□□□□□ -0.78
TOP3B-210ENST00000444502 KAT2AQ92830 837 aa10.15□□□□□ -0.78
TOP3B-210ENST00000444502 SH3YL1Q96HL8 342 aaPredicted RBP10.15□□□□□ -0.78
TOP3B-210ENST00000444502 RAB11FIP5Q9BXF6 653 aa10.15□□□□□ -0.78
TOP3B-210ENST00000444502 PRDM8Q9NQV8 689 aa10.15□□□□□ -0.78
TOP3B-210ENST00000444502 INTS6Q9UL03 887 aaKnown RBP10.15□□□□□ -0.78
TOP3B-210ENST00000444502 ZNF451Q9Y4E5 1061 aa10.15□□□□□ -0.78
TOP3B-210ENST00000444502 B3GALT2O43825 422 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 XPNPEP2O43895 674 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 AP2A2O94973 939 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 ITGB7P26010 798 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 PDHA2P29803 388 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 NCBP2P52298 156 aaKnown RBP eCLIP10.15□□□□□ -0.791e-7■□□□□ 8.3
TOP3B-210ENST00000444502 CD83Q01151 205 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 TOP3AQ13472 1001 aaPredicted RBP10.15□□□□□ -0.79
TOP3B-210ENST00000444502 GANABQ14697 944 aaKnown RBP10.15□□□□□ -0.79
TOP3B-210ENST00000444502 DUOXA1Q1HG43 343 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 DEFB134Q4QY38 66 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 CASP12Q6UXS9 341 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF420Q8TAQ5 688 aaPredicted RBP10.15□□□□□ -0.79
TOP3B-210ENST00000444502 PYURFQ96I23 114 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 MAP6Q96JE9 813 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 TGM7Q96PF1 710 aa10.15□□□□□ -0.79
TOP3B-210ENST00000444502 PTBP2Q9UKA9 531 aaKnown RBP10.15□□□□□ -0.79
TOP3B-210ENST00000444502 E7EQ34 232 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 AP3D1O14617 1153 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF26P17031 533 aaPredicted RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 PFKLP17858 780 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 MATN1P21941 496 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 PPIBP23284 216 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 RPS3P23396 243 aaKnown RBP eCLIP10.14□□□□□ -0.795e-7■□□□□ 8.4
TOP3B-210ENST00000444502 PNLIPRP1P54315 467 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 POU6F2P78424 691 aaPredicted RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 GCNT6Q5T4J0 391 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 TYW3Q6IPR3 259 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 Q6ZSR6 202 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 VTCN1Q7Z7D3 282 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 GRPEL2Q8TAA5 225 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 FGF14Q92915 247 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ZHX1-C8orf76Q96EF9 292 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 VN1R3Q9BXE9 311 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ACPTQ9BZG2 426 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ACSL5Q9ULC5 683 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 POLHQ9Y253 713 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 HS3ST2Q9Y278 367 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 GNB5O14775 395 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 LILRB3O75022 631 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 MTRF1O75570 445 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 VNN2O95498 520 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 HNRNPA2B1P22626 353 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 UQCRC1P31930 480 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 OR1E2P47887 323 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 VSX2P58304 361 aaPredicted RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 VBP1P61758 197 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 TOR1AIP1Q5JTV8 583 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 OR2T5Q6IEZ7 315 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SYCE2Q6PIF2 218 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 VRK3Q8IV63 474 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 LILRA3Q8N6C8 439 aaPredicted RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 OR8J3Q8NGG0 315 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 OR2T29Q8NH02 315 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 NUAK2Q9H093 628 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ARMC1Q9NVT9 282 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 PCDHB11Q9Y5F2 797 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SOBPA7XYQ1 873 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 RASAL1O95294 804 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 NPPAP01160 153 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 LAMP1P11279 417 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 PRKCAP17252 672 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 CTSKP43235 329 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 CLDN8P56748 225 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SUZ12Q15022 739 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 OXA1LQ15070 435 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 DPY19L1Q2PZI1 675 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ALKBH2Q6NS38 261 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SPATC1Q76KD6 591 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SVOPLQ8N434 492 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 PDPRQ8NCN5 879 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 NETO1Q8TDF5 533 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 GPR151Q8TDV0 419 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 HSH2DQ96JZ2 352 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF607Q96SK3 696 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 FAM83CQ9BQN1 747 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SLC35A5Q9BS91 424 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 RPP25Q9BUL9 199 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 SLC12A9Q9BXP2 914 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 CD300AQ9UGN4 299 aa10.14□□□□□ -0.79
TOP3B-210ENST00000444502 CDV3Q9UKY7 258 aaKnown RBP10.14□□□□□ -0.79
TOP3B-210ENST00000444502 PDPK1O15530 556 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 VEGFDO43915 354 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 OR6A2O95222 327 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 C6orf47O95873 294 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 CCNYL3P0C7X3 344 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 LHCGRP22888 699 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 AZGP1P25311 298 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 GUCA1AP43080 201 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms