RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 UCN3Q969E3 161 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ZNF582Q96NG8 517 aaPredicted RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 RRN3P2A6NIE6 340 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 TRIM46Q7Z4K8 759 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 SMG7Q92540 1137 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 TM9SF4Q92544 642 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 FCRL4Q96PJ5 515 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 POLR1EQ9GZS1 481 aaKnown RBP4.82□□□□□ -1.64
HERC1-201ENST00000443617 OR51B5Q9H339 312 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 RLIMQ9NVW2 624 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 ST3GAL5Q9UNP4 418 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 HS3ST4Q9Y661 456 aa4.82□□□□□ -1.64
HERC1-201ENST00000443617 GSAPA4D1B5 854 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 CACNG3O60359 315 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 STX11O75558 287 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 OR5F1O95221 314 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ALDH1A1P00352 501 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 GLUD1P00367 558 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 AP1S2P56377 157 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 CLDN20P56880 219 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 MGAT3Q09327 533 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PCBP1Q15365 356 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC1-201ENST00000443617 FAM182BQ5T319 152 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 NEIL3Q8TAT5 605 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 RFKQ969G6 155 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ZNF69Q9UC07 566 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ACTL7AQ9Y615 435 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 IGKV6D-21A0A0A0MT36 114 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PIRO00625 290 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 RP2O75695 350 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 CAV3P56539 151 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 MLLT11Q13015 90 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 SCARB2Q14108 478 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ZER1Q7Z7L7 766 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ZBTB2Q8N680 514 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 SIRT5Q9NXA8 310 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PLEKHB1Q9UF11 243 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 ATAD5Q96QE3 1844 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 SPTBP11277 2137 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ODC1P11926 461 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ZNF7P17097 686 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 HOXA1P49639 335 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 WDR5P61964 334 aaKnown RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 ZNF273Q14593 569 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 TRILQ7L0X0 811 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 C12orf45Q8N5I9 185 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 C3orf58Q8NDZ4 430 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 EMID1Q96A84 441 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 ELOVL2Q9NXB9 296 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 V9GYH0 126 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 XPAP23025 273 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 OR1E1P30953 314 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 TRIM23P36406 574 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 TIAL1Q01085 375 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC1-201ENST00000443617 PLK5Q496M5 336 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 RNASE12Q5GAN4 147 aaKnown RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 DUSP18Q8NEJ0 188 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 LRR1Q96L50 414 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 EXOSC1Q9Y3B2 195 aaKnown RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 H1F0P07305 194 aaKnown RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 ADRB1P08588 477 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 FAM171A1Q5VUB5 890 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 REEP3Q6NUK4 255 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 MS4A15Q8N5U1 240 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PSMG2Q969U7 264 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PARK7Q99497 189 aaKnown RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 C12orf57Q99622 126 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 GSDMCQ9BYG8 508 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ACPTQ9BZG2 426 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 GPN1Q9HCN4 374 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 RHCGQ9UBD6 479 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 FKBPLQ9UIM3 349 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 AP1M2Q9Y6Q5 423 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 UPK3BL1B0FP48 263 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 UPK3BL2E5RIL1 263 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 L7N2F9 121 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 CHP2O43745 196 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 KCNK5O95279 499 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 OR1E2P47887 323 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 FNTBP49356 437 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 HTR6P50406 440 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 AFF1P51825 1210 aaKnown RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 KCNJ10P78508 379 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 CDK6Q00534 326 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 DGKZQ13574 1117 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 HAGHLQ6PII5 290 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 PDZD3Q86UT5 571 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 RBP7Q96R05 134 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 METTL17Q9H7H0 456 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 BRD7Q9NPI1 651 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 LRP5O75197 1615 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 ZNF98A6NK75 572 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 GZMMP51124 257 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PTSQ03393 145 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 SPIN4Q56A73 249 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 OTUD1Q5VV17 481 aaPredicted RBP4.81□□□□□ -1.64
HERC1-201ENST00000443617 HIST2H2AA3Q6FI13 130 aa4.81□□□□□ -1.64
HERC1-201ENST00000443617 PRSS42Q7Z5A4 293 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms