RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ZNF840PA6NDX5 716 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PRR23AA6NEV1 266 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 GTPBP1O00178 669 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 SMSP52788 366 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 ZNF33BQ06732 778 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 ELAVL2Q12926 359 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 HDDC2Q7Z4H3 204 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 NKAPQ8N5F7 415 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 GTPBP3Q969Y2 492 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 ZNF578Q96N58 590 aaPredicted RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 IL4I1Q96RQ9 567 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 MED28Q9H204 178 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 B3GAT2Q9NPZ5 323 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PCDHGB3Q9Y5G1 929 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 LZTS3O60299 673 aaPredicted RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 PRAMEF11O60813 436 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 CCNB2O95067 398 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 SEMG1P04279 462 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 RRASP10301 218 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 BCKDHAP12694 445 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 HSPA7P48741 367 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 PPIGQ13427 754 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■□□□ 12.6
PMS1-213ENST00000441310 IL18Q14116 193 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 HECTD3Q5T447 861 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 FRMPD2BQ6IN97 320 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 GPALPP1Q8IXQ4 340 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 LRRC17Q8N6Y2 441 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 ANKRD53Q8N9V6 530 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 DUSP18Q8NEJ0 188 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 OR9Q2Q8NGE9 314 aa16.07■□□□□ 0.16
PMS1-213ENST00000441310 POLR2J2Q9GZM3 115 aaKnown RBP16.07■□□□□ 0.16
PMS1-213ENST00000441310 SLC43A1O75387 559 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CSO75390 466 aaKnown RBP16.06■□□□□ 0.16
PMS1-213ENST00000441310 SRCP12931 536 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
PMS1-213ENST00000441310 GDF5P43026 501 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CLCN4P51793 760 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 C2orf80Q0P641 193 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 PTCHD4Q6ZW05 846 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 RGL4Q8IZJ4 473 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.06■□□□□ 0.16
PMS1-213ENST00000441310 SLC22A12Q96S37 553 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 EPYCQ99645 322 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 MARVELD1Q9BSK0 173 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CD244Q9BZW8 370 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 IFT46Q9NQC8 304 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 UBQLN2Q9UHD9 624 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 PRAMEF1O95521 474 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 ZDHHC11BP0C7U3 371 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 LHCGRP22888 699 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 SDC2P34741 201 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 SLC11A2P49281 568 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 GBX2P52951 348 aaPredicted RBP16.06■□□□□ 0.16
PMS1-213ENST00000441310 GNA13Q14344 377 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 SPHARQ15513 63 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CLLU1Q5K131 121 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CNIH2Q6PI25 160 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 ADGRG3Q86Y34 549 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 GPR65Q8IYL9 337 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 ANKRA2Q9H9E1 313 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CHP2O43745 196 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 AKAP8O43823 692 aaKnown RBP16.06■□□□□ 0.16
PMS1-213ENST00000441310 TSPAN12O95859 305 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CFDP00746 253 aaPredicted RBP16.06■□□□□ 0.16
PMS1-213ENST00000441310 IFNA7P01567 189 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 ENGP17813 658 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 TPMTP51580 245 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CDH12P55289 794 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 IL2P60568 153 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 IQCCQ4KMZ1 466 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 KLHL22Q53GT1 634 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 LRIF1Q5T3J3 769 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 PAQR6Q6TCH4 344 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CBLL1Q75N03 491 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 TRIM69Q86WT6 500 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 CRIPAKQ8N1N5 446 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 TEX26Q8N6G2 289 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 LINC00469Q8N7U9 141 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 SYT14Q8NB59 555 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 OR8K5Q8NH50 307 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 USB1Q9BQ65 265 aaKnown RBP16.06■□□□□ 0.16
PMS1-213ENST00000441310 ZFP64Q9NPA5 681 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 NCKAP1Q9Y2A7 1128 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 DLGAP4Q9Y2H0 992 aa16.06■□□□□ 0.16
PMS1-213ENST00000441310 ARPC4-TTLL3A0A0A6YYG9 625 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 HYKKA2RU49 373 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 IQCF5A8MTL0 148 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 CLIC1O00299 241 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 LRRTM2O43300 516 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 FAM157BP0CG42 384 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 PTPN6P29350 595 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 MAD2L1Q13257 205 aaPredicted RBP16.05■□□□□ 0.16
PMS1-213ENST00000441310 BCL2L15Q5TBC7 163 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 ZNF621Q6ZSS3 439 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 ADGRD2Q7Z7M1 963 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 PDZD3Q86UT5 571 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 LGI4Q8N135 537 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
PMS1-213ENST00000441310 SLC9A6Q92581 669 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms