RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 POLR1BQ9H9Y6 1135 aa7.55□□□□□ -1.2
APP-209ENST00000440126 DMRT3Q9NQL9 472 aa7.55□□□□□ -1.2
APP-209ENST00000440126 FBXL12Q9NXK8 326 aa7.55□□□□□ -1.2
APP-209ENST00000440126 ZFR2Q9UPR6 939 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 RUVBL1Q9Y265 456 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 MDC1Q14676 2089 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 H0YIV9 168 aa7.55□□□□□ -1.2
APP-209ENST00000440126 M0R129 80 aa7.55□□□□□ -1.2
APP-209ENST00000440126 XPNPEP2O43895 674 aa7.55□□□□□ -1.2
APP-209ENST00000440126 KLHL18O94889 574 aa7.55□□□□□ -1.2
APP-209ENST00000440126 NPPAP01160 153 aa7.55□□□□□ -1.2
APP-209ENST00000440126 RB1P06400 928 aa7.55□□□□□ -1.2
APP-209ENST00000440126 HOXB9P17482 250 aaPredicted RBP7.55□□□□□ -1.2
APP-209ENST00000440126 MYF6P23409 242 aa7.55□□□□□ -1.2
APP-209ENST00000440126 ACADLP28330 430 aa7.55□□□□□ -1.2
APP-209ENST00000440126 CRYBA2P53672 197 aa7.55□□□□□ -1.2
APP-209ENST00000440126 HYAL1Q12794 435 aa7.55□□□□□ -1.2
APP-209ENST00000440126 PMS2P3Q13401 168 aa7.55□□□□□ -1.2
APP-209ENST00000440126 CAMK2GQ13555 558 aaPredicted RBP7.55□□□□□ -1.2
APP-209ENST00000440126 VMACQ2NL98 169 aa7.55□□□□□ -1.2
APP-209ENST00000440126 CTU2Q2VPK5 515 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 ATAD3BQ5T9A4 648 aa7.55□□□□□ -1.2
APP-209ENST00000440126 GPR107Q5VW38 600 aa7.55□□□□□ -1.2
APP-209ENST00000440126 FAM205BPQ63HN1 556 aa7.55□□□□□ -1.2
APP-209ENST00000440126 METTL2BQ6P1Q9 378 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 NXPE4Q6UWF7 544 aa7.55□□□□□ -1.2
APP-209ENST00000440126 CALHM3Q86XJ0 350 aa7.55□□□□□ -1.2
APP-209ENST00000440126 RASGRP3Q8IV61 690 aa7.55□□□□□ -1.2
APP-209ENST00000440126 SFTPA2Q8IWL1 248 aa7.55□□□□□ -1.2
APP-209ENST00000440126 ZC3H7AQ8IWR0 971 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 NRSN1Q8IZ57 195 aa7.55□□□□□ -1.2
APP-209ENST00000440126 TTLQ8NG68 377 aa7.55□□□□□ -1.2
APP-209ENST00000440126 OR2L2Q8NH16 312 aa7.55□□□□□ -1.2
APP-209ENST00000440126 CHTF18Q8WVB6 975 aa7.55□□□□□ -1.2
APP-209ENST00000440126 TANKQ92844 425 aa7.55□□□□□ -1.2
APP-209ENST00000440126 TESCQ96BS2 214 aa7.55□□□□□ -1.2
APP-209ENST00000440126 FCRL4Q96PJ5 515 aa7.55□□□□□ -1.2
APP-209ENST00000440126 RBM14Q96PK6 669 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
APP-209ENST00000440126 ZNF717Q9BY31 904 aaPredicted RBP7.55□□□□□ -1.2
APP-209ENST00000440126 ZCCHC2Q9C0B9 1178 aaKnown RBP7.55□□□□□ -1.2
APP-209ENST00000440126 CCDC90BQ9GZT6 254 aa7.55□□□□□ -1.2
APP-209ENST00000440126 SLC28A3Q9HAS3 691 aa7.55□□□□□ -1.2
APP-209ENST00000440126 GPATCH2Q9NW75 528 aa7.55□□□□□ -1.2
APP-209ENST00000440126 SIRT5Q9NXA8 310 aa7.55□□□□□ -1.2
APP-209ENST00000440126 IFT80Q9P2H3 777 aaPredicted RBP7.55□□□□□ -1.2
APP-209ENST00000440126 THAP10Q9P2Z0 257 aaPredicted RBP7.55□□□□□ -1.2
APP-209ENST00000440126 RHCGQ9UBD6 479 aa7.55□□□□□ -1.2
APP-209ENST00000440126 TESMINQ9Y4I5 508 aa7.55□□□□□ -1.2
APP-209ENST00000440126 TBC1D3DA0A087WVF3 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3IA0A087WXS9 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3EA0A087X179 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3KA0A087X1G2 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 A0A1W2PQU0 124 aa7.54□□□□□ -1.2
APP-209ENST00000440126 A0A1W2PS29 197 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3FA6NER0 549 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 FAM220BPB1ANY3 271 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3LB9A6J9 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 J3KTA2 159 aa7.54□□□□□ -1.2
APP-209ENST00000440126 SCELO95171 688 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3HP0C7X1 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 COL9A1P20849 921 aa7.54□□□□□ -1.2
APP-209ENST00000440126 CD247P20963 164 aa7.54□□□□□ -1.2
APP-209ENST00000440126 AK4P27144 223 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 FMO3P31513 532 aa7.54□□□□□ -1.2
APP-209ENST00000440126 ALDH3A2P51648 485 aa7.54□□□□□ -1.2
APP-209ENST00000440126 PPP2CBP62714 309 aa7.54□□□□□ -1.2
APP-209ENST00000440126 PPP2CAP67775 309 aa7.54□□□□□ -1.2
APP-209ENST00000440126 ABHD18Q0P651 414 aa7.54□□□□□ -1.2
APP-209ENST00000440126 HSPB3Q12988 150 aa7.54□□□□□ -1.2
APP-209ENST00000440126 CSTF3Q12996 717 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 SNTA1Q13424 505 aa7.54□□□□□ -1.2
APP-209ENST00000440126 SMN1Q16637 294 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 RPS26P11Q5JNZ5 115 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 CDKL4Q5MAI5 379 aa7.54□□□□□ -1.2
APP-209ENST00000440126 ATG9BQ674R7 924 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3GQ6DHY5 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3CQ6IPX1 549 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TNFAIP8L2Q6P589 184 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 TMIGD1Q6UXZ0 262 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TMEM26Q6ZUK4 368 aa7.54□□□□□ -1.2
APP-209ENST00000440126 CYP4Z1Q86W10 505 aa7.54□□□□□ -1.2
APP-209ENST00000440126 RNF130Q86XS8 419 aa7.54□□□□□ -1.2
APP-209ENST00000440126 LRRC56Q8IYG6 542 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 TBC1D3Q8IZP1 549 aaPredicted RBP7.54□□□□□ -1.2
APP-209ENST00000440126 CPA6Q8N4T0 437 aa7.54□□□□□ -1.2
APP-209ENST00000440126 CCL4L1Q8NHW4 92 aa7.54□□□□□ -1.2
APP-209ENST00000440126 SPPL2AQ8TCT8 520 aa7.54□□□□□ -1.2
APP-209ENST00000440126 TTC9Q92623 222 aa7.54□□□□□ -1.2
APP-209ENST00000440126 RAB8BQ92930 207 aa7.54□□□□□ -1.2
APP-209ENST00000440126 EXOSC8Q96B26 276 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 PYURFQ96I23 114 aa7.54□□□□□ -1.2
APP-209ENST00000440126 REXO5Q96IC2 774 aaKnown RBP7.54□□□□□ -1.2
APP-209ENST00000440126 C19orf43Q9BQ61 176 aa7.54□□□□□ -1.2
APP-209ENST00000440126 MUC13Q9H3R2 512 aa7.54□□□□□ -1.2
APP-209ENST00000440126 GORASP2Q9H8Y8 452 aa7.54□□□□□ -1.2
APP-209ENST00000440126 ANKRA2Q9H9E1 313 aa7.54□□□□□ -1.2
APP-209ENST00000440126 ASIC5Q9NY37 505 aa7.54□□□□□ -1.2
APP-209ENST00000440126 DNAJB9Q9UBS3 223 aa7.54□□□□□ -1.2
APP-209ENST00000440126 MAN2B2Q9Y2E5 1009 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms