RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 EOGTQ5NDL2 527 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 LYSMD4Q5XG99 296 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 NADSYN1Q6IA69 706 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TWF2Q6IBS0 349 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 AADACL2Q6P093 401 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 NIPAL3Q6P499 406 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC39A4Q6P5W5 647 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 LRRC8BQ6P9F7 803 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMIGD1Q6UXZ0 262 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 LEKR1Q6ZMV7 388 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPRIN3Q6ZVF9 776 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PEG10Q86TG7 708 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ANKRD46Q86W74 232 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 IZUMO1Q8IYV9 350 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF683Q8IZ20 524 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADGRF3Q8IZF5 1079 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SIDT2Q8NBJ9 832 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ENKURQ8TC29 256 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 OSCP1Q8WVF1 389 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TFAP2BQ92481 460 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC35B4Q969S0 331 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SARAFQ96BY9 339 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CTHRC1Q96CG8 243 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF514Q96K75 400 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TESK2Q96S53 571 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCT8L2Q96SF2 557 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DDOQ99489 341 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SELENOSQ9BQE4 189 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM47Q9BQJ4 181 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PELOQ9BRX2 385 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM175Q9BSA9 504 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM79Q9BSE2 394 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CNPY3Q9BT09 278 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 MSTO1Q9BUK6 570 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 EFHD1Q9BUP0 239 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CINPQ9BW66 212 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 IDI2Q9BXS1 227 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CADM1Q9BY67 442 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PARD6GQ9BYG4 376 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 NDEL1Q9GZM8 345 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR2AG1Q9H205 316 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PIGMQ9H3S5 423 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 TBC1D17Q9HA65 648 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DNAJC4Q9NNZ3 241 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 MS4A12Q9NXJ0 267 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PAQR5Q9NXK6 330 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ANKRD10Q9NXR5 420 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 CLEC5AQ9NY25 188 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 COPS7AQ9UBW8 275 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SERTAD3Q9UJW9 196 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PIGLQ9Y2B2 252 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 RBMX2Q9Y388 322 aaKnown RBP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR10H1Q9Y4A9 318 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ATG4BQ9Y4P1 393 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PCDHGB1Q9Y5G3 927 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 PUS1Q9Y606 427 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 WNT6Q9Y6F9 365 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAD50Q92878 1312 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF521Q96K83 1311 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 SALL1Q9NSC2 1324 aa3.4□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPPA5A6NC42 116 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 METTL21EPA6NDL7 271 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM8BA6NDV4 472 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ANKUB1A6NFN9 424 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 NEMP2A6NFY4 417 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 WASHC1A8K0Z3 465 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLGA8RI6L899 631 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 PDLIM1O00151 329 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPR171O14626 319 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 BCKDKO14874 412 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 RAD51BO15315 384 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 YY2O15391 372 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ATP2C2O75185 946 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CSN3P07498 182 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ANXA4P09525 319 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ALDOCP09972 364 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 MYL6BP14649 208 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CPA3P15088 417 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 EZRP15311 586 aaKnown RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 POLR2CP19387 275 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ITPKBP27987 946 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 NMBRP28336 390 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CD40LGP29965 261 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 LIPAP38571 399 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FOLR3P41439 243 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDX1P47902 265 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 HSPA13P48723 471 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 ARRB1P49407 418 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CXCR3P49682 368 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 FHITP49789 147 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC7A2P52569 658 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CDH4P55283 916 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 GSDMDP57764 484 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 RGS8P57771 180 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CSNK1G2P78368 415 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCZ1BP86790 482 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCZ1P86791 482 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC34A1Q06495 639 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 LGALS3BPQ08380 585 aa3.39□□□□□ -1.87
HMGB1P12-201ENST00000438594 DSC1Q08554 894 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms