RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR7A2PQ8NGA2 310 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 PITHD1Q9GZP4 211 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-207ENST00000429896 DSN1Q9H410 356 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 FGF22Q9HCT0 170 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TM7SF3Q9NS93 570 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 SMOXQ9NWM0 555 aa12.37□□□□□ -0.43
PTCH1-207ENST00000429896 TYROBPO43914 113 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 DNAJA2O60884 412 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 UGT2B17O75795 530 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 GSTM2P28161 218 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 ADARP55265 1226 aaKnown RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 EIPR1Q53HC9 387 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 ZNF730Q6ZMV8 503 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 RASSF6Q6ZTQ3 369 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 OR10H5Q8NGA6 315 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 CDC6Q99741 560 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 PCTPQ9UKL6 214 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 C1orf226A1L170 272 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 K7EQS6 105 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 GSC2O15499 205 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 TPD52L2O43399 206 aaKnown RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 ANPEPP15144 967 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 OTX2P32243 289 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 FOLR3P41439 243 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 TOP3AQ13472 1001 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 SMARCD3Q6STE5 483 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 ASB11Q8WXH4 323 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 L3HYPDHQ96EM0 354 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 EBF4Q9BQW3 602 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 YIPF4Q9BSR8 244 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 CHMP1AQ9HD42 196 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 G3V2T6 193 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 ALPPP05187 535 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 G6PDP11413 515 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 NR4A1P22736 598 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 TIA1P31483 386 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 RGS8P57771 180 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 GBX1Q14549 363 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 RANBP3LQ86VV4 465 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 KLHDC8AQ8IYD2 350 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 FRS2Q8WU20 508 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 FAR1Q8WVX9 515 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 GAB3Q8WWW8 586 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 POM121BA6NF01 834 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 POU2F1P14859 743 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 AAGABQ6PD74 315 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 PTERQ96BW5 349 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 CHRDQ9H2X0 955 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 SDHAF3Q9NRP4 125 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 KLRF1Q9NZS2 232 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 MAGEB3O15480 346 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 MTRF1O75570 445 aaKnown RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 PDCD4Q53EL6 469 aaKnown RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 ALG1LQ6GMV1 187 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 C6orf89Q6UWU4 347 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 SATL1Q86VE3 508 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 RAB43Q86YS6 212 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 CHST4Q8NCG5 386 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 DAZLQ92904 295 aaKnown RBP12.36□□□□□ -0.43
PTCH1-207ENST00000429896 TCTN2Q96GX1 697 aa12.36□□□□□ -0.43
PTCH1-207ENST00000429896 UGDHO60701 494 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 STX11O75558 287 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 SERPINA1P01009 418 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 IL1RNP18510 177 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 XKP51811 444 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 LIPEQ05469 1076 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 IL18R1Q13478 541 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PYCR3Q53H96 274 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ATG9BQ674R7 924 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 OR52E8Q6IFG1 317 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 NOXRED1Q6NXP6 359 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 OR5AK3PQ8NH89 298 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 SERINC2Q96SA4 455 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 FAM192AQ9GZU8 254 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 TRPV5Q9NQA5 729 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PRODH2Q9UF12 536 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ERGIC3Q9Y282 383 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PRORSD1PA6NEY8 169 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 IL3P08700 152 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PIK3CBP42338 1070 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 MZT2BQ6NZ67 158 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 METTL2BQ6P1Q9 378 aaKnown RBP12.35□□□□□ -0.43
PTCH1-207ENST00000429896 EPGNQ6UW88 154 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ARL10Q8N8L6 244 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 PEX11GQ96HA9 241 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.35□□□□□ -0.43
PTCH1-207ENST00000429896 FAM120CQ9NX05 1096 aaKnown RBP12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ANKMY1Q9P2S6 941 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 FAM86C2PA6NEL3 165 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 CD63P08962 238 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 COL9A1P20849 921 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 TMEM215Q68D42 235 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ZFAND4Q86XD8 727 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 SPPL2CQ8IUH8 684 aa12.35□□□□□ -0.43
PTCH1-207ENST00000429896 ARL14Q8N4G2 192 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms