RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PIPOXQ9P0Z9 390 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 APOBEC3BQ9UH17 382 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 PITPNC1Q9UKF7 332 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 MAN1B1Q9UKM7 699 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ABT1Q9ULW3 272 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 B9D1Q9UPM9 204 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 PRG3Q9Y2Y8 225 aaPredicted RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 RBMX2Q9Y388 322 aaKnown RBP2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 ARHGEF40Q8TER5 1519 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 INSRP06213 1382 aa2.96□□□□□ -1.94
CTDSPL-203ENST00000416688 CDHR2Q9BYE9 1310 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 A0A0G2JLW4 131 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 A0A1B0GVL5 298 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 DPPA5A6NC42 116 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM8BA6NDV4 472 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM150CB9EJG8 249 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 E7EWF7 191 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 C1QTNF3-AMACRE9PGA6 284 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MS4A18H0YCH9 400 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 H0YIG0 161 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 IFNL4K9M1U5 179 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PDLIM1O00151 329 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 DHX15O43143 795 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ADAM12O43184 909 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SRGAP3O43295 1099 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TRIAP1O43715 76 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SCO2O43819 266 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 OR10H3O60404 316 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PRAF2O60831 178 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ATP2C2O75185 946 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 LRCH4O75427 683 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 HIST1H2AGP0C0S8 130 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 OR2T7P0C7T2 308 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CALM1P0DP23 149 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CALM2P0DP24 149 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CALM3P0DP25 149 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 VSIG10L2P0DP72 767 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CEACAM1P13688 526 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 NID1P14543 1247 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 GP9P14770 177 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 NAGAP17050 411 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CTRB1P17538 263 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 EDN2P20800 178 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 UQCRC2P22695 453 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 NMBRP28336 390 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ALDH3A1P30838 453 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 STX2P32856 288 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CYP2C18P33260 490 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MAGEA2P43356 314 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 MAGEA11P43364 429 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ARRB1P49407 418 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SERPINB9P50453 376 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TPMTP51580 245 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 KCNQ1P51787 676 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CLDN18P56856 261 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC37A1P57057 533 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CLDN2P57739 230 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 NXPH1P58417 271 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 GPX6P59796 221 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 UBE2G2P60604 165 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 RAB4BP61018 213 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SUMO2P61956 95 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SNRPEP62304 92 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SIM1P81133 766 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PRKCQQ04759 706 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CHRNEQ04844 493 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 IL10RBQ08334 325 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SCRN3Q0VDG4 424 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PJVKQ0ZLH3 352 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ITGADQ13349 1161 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ORC2Q13416 577 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 KEAP1Q14145 624 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CRMP1Q14194 572 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SPCS2Q15005 226 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PTPRRQ15256 657 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ETFDHQ16134 617 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 EXT1Q16394 746 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 KYAT1Q16773 422 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 BMT2Q1RMZ1 405 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CTU2Q2VPK5 515 aaKnown RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 KLHL22Q53GT1 634 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 AGKQ53H12 422 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 C2CD6Q53TS8 623 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 XKR6Q5GH73 641 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CTRB2Q6GPI1 263 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF425Q6IV72 752 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 C11orf63Q6NUN7 778 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC39A4Q6P5W5 647 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ANKRD16Q6P6B7 361 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 KCNIP4Q6PIL6 250 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 PAQR3Q6TCH7 311 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 SLCO4C1Q6ZQN7 724 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 TPRG1Q6ZUI0 275 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 UTS2BQ765I0 119 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ARCQ7LC44 396 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 ABHD12BQ7Z5M8 362 aaPredicted RBP2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CCDC190Q86UF4 302 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 IGFN1Q86VF2 1251 aa2.95□□□□□ -1.94
CTDSPL-203ENST00000416688 CCDC25Q86WR0 208 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms