RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SAMD4BQ5PRF9 694 aaKnown RBP13.8□□□□□ -0.2
SGCE-202ENST00000415788 DCAF12Q5T6F0 453 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 YOD1Q5VVQ6 348 aaPredicted RBP13.8□□□□□ -0.2
SGCE-202ENST00000415788 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 ZBTB49Q6ZSB9 765 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 CHSY3Q70JA7 882 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 VN1R4Q7Z5H5 301 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 CSNK1A1LQ8N752 337 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 CDYL2Q8N8U2 506 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 ANKRD53Q8N9V6 530 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 METTL6Q8TCB7 284 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
SGCE-202ENST00000415788 SLC13A3Q8WWT9 602 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 TFAP2CQ92754 450 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 ISOC1Q96CN7 298 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 COX4I2Q96KJ9 171 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 TAAR9Q96RI9 348 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 NRSN2Q9GZP1 204 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 POLR1BQ9H9Y6 1135 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 SPAG4Q9NPE6 437 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 ARMC1Q9NVT9 282 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 PISDQ9UG56 409 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 ITGB1BP2Q9UKP3 347 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 PCDHGA3Q9Y5H0 932 aa13.8□□□□□ -0.2
SGCE-202ENST00000415788 CNOT1A5YKK6 2376 aaKnown RBP13.8□□□□□ -0.2
SGCE-202ENST00000415788 LOC105369274A0A096LPK9 316 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 LOC102723532A0A0G2JNH3 316 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 SDHDO14521 159 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 MAGEB3O15480 346 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 NDUFS4O43181 175 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 HCRTR1O43613 425 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 UROSP10746 265 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 PCNAP12004 261 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 MYF6P23409 242 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 CCR10P46092 362 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 ENTPD1P49961 510 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 ZNF829Q3KNS6 432 aaPredicted RBP13.79□□□□□ -0.2
SGCE-202ENST00000415788 INTS11Q5TA45 600 aaKnown RBP13.79□□□□□ -0.2
SGCE-202ENST00000415788 GARNL3Q5VVW2 1013 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 TMEM198Q66K66 360 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 IGF2-ASQ6U949 168 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 CLVS1Q8IUQ0 354 aaPredicted RBP13.79□□□□□ -0.2
SGCE-202ENST00000415788 OR4N4Q8N0Y3 316 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 TTC29Q8NA56 475 aaPredicted RBP13.79□□□□□ -0.2
SGCE-202ENST00000415788 GOLM1Q8NBJ4 401 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 WDR20Q8TBZ3 569 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 NT5CQ8TCD5 201 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 TM4SF19Q96DZ7 209 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 SEMA6AQ9H2E6 1030 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 PALMDQ9NP74 551 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 CD300AQ9UGN4 299 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 PPT2Q9UMR5 302 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 SNX13Q9Y5W8 968 aa13.79□□□□□ -0.2
SGCE-202ENST00000415788 URADA6NGE7 173 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 H3BMH7 237 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 AGRPO00253 132 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 FOXE1O00358 373 aaPredicted RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 AZIN1O14977 448 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 CHEK2O96017 543 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 EIF2S1P05198 315 aaKnown RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 ITIH1P19827 911 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 ARSFP54793 590 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 NME5P56597 212 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 PRTGQ2VWP7 1150 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 FAM214AQ32MH5 1076 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 MTX3Q5HYI7 312 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 CLYBLQ8N0X4 340 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 HUS1BQ8NHY5 278 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 GIPC3Q8TF64 312 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 SLCO4A1Q96BD0 722 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 DOK1Q99704 481 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 SRPK3Q9UPE1 567 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 A0A1W2PNU3 283 aaPredicted RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 FFAR3O14843 346 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 GPR42O15529 346 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 ULK1O75385 1050 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 STT3AP46977 705 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 MAPK10P53779 464 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 STXBP1P61764 594 aaKnown RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 CYP4F2P78329 520 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 GABREP78334 506 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 NDUFA9Q16795 377 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 REP15Q6BDI9 236 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 RNF165Q6ZSG1 346 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 CREB3L4Q8TEY5 395 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 SELENOMQ8WWX9 145 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 C12orf43Q96C57 262 aaKnown RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 SLC29A1Q99808 456 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 SLC25A23Q9BV35 468 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 TRIM15Q9C019 465 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 SYNPO2LQ9H987 977 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 LIN28AQ9H9Z2 209 aaKnown RBP13.78□□□□□ -0.2
SGCE-202ENST00000415788 BRF2Q9HAW0 419 aa13.78□□□□□ -0.2
SGCE-202ENST00000415788 PRM3Q9NNZ6 103 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms