RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 APIPQ96GX9 242 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PTCHD1Q96NR3 888 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 C20orf27Q9GZN8 174 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 TUBB1Q9H4B7 451 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PRDM9Q9NQV7 894 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 NMRK1Q9NWW6 199 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 LYARQ9NX58 379 aaKnown RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 ZDHHC2Q9UIJ5 367 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 PHF11Q9UIL8 331 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 ADAM29Q9UKF5 820 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 MRPS33Q9Y291 106 aaKnown RBP13.11□□□□□ -0.31
CPNE1-206ENST00000412056 TRAF6Q9Y4K3 522 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 ATG4BQ9Y4P1 393 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 MMACHCQ9Y4U1 282 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 ASB4Q9Y574 426 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 DNAJC15Q9Y5T4 150 aa13.11□□□□□ -0.31
CPNE1-206ENST00000412056 CPAMD8Q8IZJ3 1885 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 IGHV1-45A0A0A0MS14 117 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 A0A1W2PQ72 361 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 ERVH48-1M5A8F1 160 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 HPP00738 406 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 FGF4P08620 206 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 FAM87AP0C7U9 286 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 GRK2P25098 689 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 SLC1A6P48664 564 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 POLE2P56282 527 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
CPNE1-206ENST00000412056 TNFRSF17Q02223 184 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 ACSM2AQ08AH3 577 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 BST1Q10588 318 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 STX3Q13277 289 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 NSDHLQ15738 373 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 UGT3A2Q3SY77 523 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 SFT2D3Q587I9 215 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 CCNYL2Q5T2Q4 361 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 ACSM2BQ68CK6 577 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 PAGE2Q7Z2X7 111 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 TRIM46Q7Z4K8 759 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 CPEB2Q7Z5Q1 589 aaKnown RBP13.1□□□□□ -0.31
CPNE1-206ENST00000412056 GPR180Q86V85 440 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 ZNF595Q8IYB9 648 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 CLYBLQ8N0X4 340 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 OR2T11Q8NH01 316 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 TWIST2Q8WVJ9 160 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 FER1L6-AS2Q96M78 137 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 SORT1Q99523 831 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 ARHGAP9Q9BRR9 750 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 TEX10Q9NXF1 929 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-206ENST00000412056 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
CPNE1-206ENST00000412056 CCL27Q9Y4X3 112 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 SPACA6W5XKT8 324 aa13.1□□□□□ -0.31
CPNE1-206ENST00000412056 NSG1A0A0A6YYJ2 146 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 MYOCOSA0A1B0GUC4 107 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 A0A1W2PR48 441 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 TCRBV16S1A1N1A0A5B0 115 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 ARHGAP10A1A4S6 786 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 CLDN4O14493 209 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 PCDH17O14917 1159 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 PIP5K1BO14986 540 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 PROM1O43490 865 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 LDB3O75112 727 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 SKAP2O75563 359 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-206ENST00000412056 RSL1D1O76021 490 aaKnown RBP13.09□□□□□ -0.31
CPNE1-206ENST00000412056 SEC24DO94855 1032 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-206ENST00000412056 AIFM1O95831 613 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 CHEK2O96017 543 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 LINC00032P0C843 101 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 NR2F6P10588 404 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 CCL11P51671 97 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 MAPK12P53778 367 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 HSD17B7P56937 341 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 OR4D2P58180 307 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 ID2Q02363 134 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 Q0VFX4 171 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 SLC13A2Q13183 592 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 SPIN4Q56A73 249 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 RNF165Q6ZSG1 346 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 PARP9Q8IXQ6 854 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 ZNF781Q8N8C0 355 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 EXD3Q8N9H8 876 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 UCN3Q969E3 161 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 VPS50Q96JG6 964 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-206ENST00000412056 WDR77Q9BQA1 342 aaPredicted RBP13.09□□□□□ -0.31
CPNE1-206ENST00000412056 EBPLQ9BY08 206 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 ZNF700Q9H0M5 742 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 ZNF160Q9HCG1 818 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 RIC8BQ9NVN3 520 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
CPNE1-206ENST00000412056 GLOD5A6NK44 160 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 A6NL46 340 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 WASHC1A8K0Z3 465 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 A8MUA0 341 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 SLC28A1O00337 649 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 PCDH7O60245 1069 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 FGF17O60258 216 aa13.08□□□□□ -0.32
CPNE1-206ENST00000412056 CELA2AP08217 269 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms