RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HOXB9P17482 250 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-204ENST00000409727 PTGER1P34995 402 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 SOAT1P35610 550 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 GSTM5P46439 218 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 ARFIP1P53367 373 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 EEFSECP57772 596 aaKnown RBP11.79□□□□□ -0.52
CHMP3-204ENST00000409727 OR4D2P58180 307 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 DAB2P98082 770 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 HSPB3Q12988 150 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 RUNX2Q13950 521 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 NR1D2Q14995 579 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 MRM1Q6IN84 353 aaKnown RBP11.79□□□□□ -0.52
CHMP3-204ENST00000409727 SPATA24Q86W54 205 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 C10orf111Q8N326 155 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 DNAJB8Q8NHS0 232 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 SMIM10Q96HG1 83 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 SERINC2Q96SA4 455 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 CD180Q99467 661 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 TMEM121BQ9BXQ6 578 aaPredicted RBP11.79□□□□□ -0.52
CHMP3-204ENST00000409727 ASXL3Q9C0F0 2248 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 EPB41L1Q9H4G0 881 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 SLAMF7Q9NQ25 335 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 ACSL6Q9UKU0 697 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 VPS4AQ9UN37 437 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 WBP11Q9Y2W2 641 aaKnown RBP11.79□□□□□ -0.52
CHMP3-204ENST00000409727 SPEGQ15772 3267 aa11.79□□□□□ -0.52
CHMP3-204ENST00000409727 PROM1O43490 865 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 STAMBPO95630 424 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 DRD2P14416 443 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF10P21506 573 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 CPN2P22792 545 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 MANFP55145 182 aaKnown RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 LIM2P55344 173 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SESN3P58005 492 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 CCL7P80098 99 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 MRPS22P82650 360 aaKnown RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 GPR19Q15760 415 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF750Q32MQ0 723 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF551Q7Z340 670 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 TMPRSS9Q7Z410 1059 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 DHFR2Q86XF0 187 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 METTL27Q8N6F8 245 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 OR9A4Q8NGU2 314 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 LRGUKQ96M69 825 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 CSF3RQ99062 836 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SH3GL1Q99961 368 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ROGDIQ9GZN7 287 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 LYARQ9NX58 379 aaKnown RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 PLCL2Q9UPR0 1127 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 CLCA2Q9UQC9 943 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 RP1P56715 2156 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 NUP214P35658 2090 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 A0A0A6YYC8 382 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 A0A1W2PS29 197 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 C1orf226A1L170 272 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 EVPLLA8MZ36 301 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 I3L1I5 382 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 RDH16O75452 317 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SCELO95171 688 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 MED26O95402 600 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 NR2F6P10588 404 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ATP6V1B2P21281 511 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 HSD11B2P80365 405 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SIM1P81133 766 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 MANEAQ5SRI9 462 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 WDR74Q6RFH5 385 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SPPL2CQ8IUH8 684 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 FAM181AQ8N9Y4 354 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 OR2T12Q8NG77 320 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 OR6C4Q8NGE1 309 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 IFI44Q8TCB0 444 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 KLHL6Q8WZ60 621 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 FAM120BQ96EK7 910 aaKnown RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 RNF31Q96EP0 1072 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 RSRC1Q96IZ7 334 aaKnown RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ZNF583Q96ND8 569 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SLC35A5Q9BS91 424 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 SPRTNQ9H040 489 aaPredicted RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 KAT8Q9H7Z6 458 aaKnown RBP11.78□□□□□ -0.52
CHMP3-204ENST00000409727 TPT1P8Q9HAU6 139 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 RNPEPL1Q9HAU8 725 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 ANKHQ9HCJ1 492 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 PRDM4Q9UKN5 801 aa11.78□□□□□ -0.52
CHMP3-204ENST00000409727 MN1Q10571 1320 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 A0A1W2PQM1 296 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 LNP1A1A4G5 178 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 EME2A4GXA9 379 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 TMEM150CB9EJG8 249 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 TNFRSF10AO00220 468 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 ARPC2O15144 300 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 PCDHGA12O60330 932 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 SRPX2O60687 465 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 BAG2O95816 211 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 FEN1P39748 380 aaKnown RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 BUD31P41223 144 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 GABRA4P48169 554 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 NCBP2P52298 156 aaKnown RBP eCLIP11.77□□□□□ -0.531e-8■□□□□ 11.3
CHMP3-204ENST00000409727 TNFRSF17Q02223 184 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms