RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 GFM1Q96RP9 751 aaKnown RBP24.06■■□□□ 1.44
SPIRE1-202ENST00000409402 MARCH4Q9P2E8 410 aaPredicted RBP24.06■■□□□ 1.44
SPIRE1-202ENST00000409402 BCAS2O75934 225 aaPredicted RBP24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 FDXRP22570 491 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 FADDQ13158 208 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 ARSJQ5FYB0 599 aaPredicted RBP24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 TOX2Q96NM4 488 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 NSUN5Q96P11 429 aaKnown RBP24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 OR51I1Q9H343 314 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 FBRSL1Q9HCM7 1045 aaKnown RBP24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 PRAMEF26H0Y7S4 382 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 ARSAP15289 507 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 DSC1Q08554 894 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 PGAP3Q96FM1 320 aaPredicted RBP24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 OR1F2PQ96R84 312 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 SP140LQ9H930 580 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 HCFC1R1Q9NWW0 138 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 C4BP0C0L5 1744 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 AHDC1Q5TGY3 1603 aaPredicted RBP24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 OR2B6P58173 313 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 TAS2R43P59537 309 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 RPA4Q13156 261 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 MANEALQ5VSG8 457 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 ZNF227Q86WZ6 799 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 TMED9Q9BVK6 235 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 ZNF221Q9UK13 617 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 CRYBG1Q9Y4K1 1723 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 CLDN25C9JDP6 229 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 ACOX3O15254 700 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 AK1P00568 194 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 PGCP20142 388 aa24.05■■□□□ 1.44
SPIRE1-202ENST00000409402 TMEM189-UBE2V1I3L0A0 370 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 OTX2P32243 289 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 ARSFP54793 590 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 FOXK1P85037 733 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 EGFLAMQ63HQ2 1017 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 TMEM107Q6UX40 140 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 DGLUCYQ7Z3D6 616 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 OR56A3Q8NH54 315 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 THRSPQ92748 146 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 WASF3Q9UPY6 502 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 MYOCOSA0A1B0GUC4 107 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 C11orf98E9PRG8 122 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 RFPL1O75677 317 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 FGF3P11487 239 aaPredicted RBP24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 CST5P28325 142 aaPredicted RBP24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 CDKN2DP55273 166 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 RNF220Q5VTB9 566 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 ATG9BQ674R7 924 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 OR8J3Q8NGG0 315 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 FAM227AF5H4B4 570 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 PLD2O14939 933 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 PROS1P07225 676 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 MVKQ03426 396 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 RAET1LQ5VY80 246 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 KLHDC10Q6PID8 442 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 CARM1Q86X55 608 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 STX12Q86Y82 276 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 NAA11Q9BSU3 229 aaPredicted RBP24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 CBLBQ13191 982 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 LPAL2Q16609 132 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 ZFP69Q49AA0 526 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 ZNF283Q8N7M2 679 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 FIZ1Q96SL8 496 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 PRAMEF33A0A0G2JMD5 474 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 PRAMEF10O60809 474 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 INMTO95050 263 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 RORAP35398 523 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 SLC15A1P46059 708 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 NOVP48745 357 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 DIO3P55073 304 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 PPP1R8Q12972 351 aaKnown RBP24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 OCLNQ16625 522 aa24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 ZBED3Q96IU2 234 aaPredicted RBP24.04■■□□□ 1.44
SPIRE1-202ENST00000409402 HLA-DPB1P04440 258 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 DSG2Q14126 1118 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 FAM69BQ5VUD6 431 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 CHRDL2Q6WN34 429 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 RHBDD1Q8TEB9 315 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 TTYH2Q9BSA4 534 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 SH3PXD2BA1X283 911 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 P04436 131 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 PUDPQ08623 228 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 ZMYND11Q15326 602 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 NNATQ16517 81 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 NPWQ8N729 165 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 OR2L8Q8NGY9 312 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 CCDC107Q8WV48 283 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 ITPAQ9BY32 194 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 KDM4BO94953 1096 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 GPR143P51810 404 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 NUDT6P53370 316 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 CLDN10P78369 228 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 ACY1Q03154 408 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 TMEM135Q86UB9 458 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 TMEM203Q969S6 136 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 TEX13CA0A0J9YWL9 993 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 CIB4A0PJX0 185 aa24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 CDC40O60508 579 aaKnown RBP eCLIP24.03■■□□□ 1.44
SPIRE1-202ENST00000409402 PPM1BO75688 479 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms