RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SRSF1Q07955 248 aaKnown RBP eCLIP16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 STX4Q12846 297 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 EIF2S3LQ2VIR3 472 aaKnown RBP16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 OR4N5Q8IXE1 308 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 THAP3Q8WTV1 239 aaPredicted RBP16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 NTMT1Q9BV86 223 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 ALOXE3Q9BYJ1 711 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 RNF32Q9H0A6 362 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 ABI3Q9P2A4 366 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 TSC22D4Q9Y3Q8 395 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 SPACA6W5XKT8 324 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 RP1L1Q8IWN7 2480 aaPredicted RBP16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 FLNCQ14315 2725 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 PRRC2CQ9Y520 2896 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 SUPT7LO94864 414 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 GBAP04062 536 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 KRT15P19012 456 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 CD96P40200 585 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 HNRNPH2P55795 449 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 HERVK_113P63132 956 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 OC90Q02509 493 aaPredicted RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 TUBA3CQ13748 450 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 UNC50Q53HI1 259 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 FRG2Q64ET8 278 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 C18orf63Q68DL7 685 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 LETMD1Q6P1Q0 360 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 TUBA3EQ6PEY2 450 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 RPS19BP1Q86WX3 136 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 OR2W6PQ8NHA6 318 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 SUN3Q8TAQ9 357 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 PRR7Q8TB68 274 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 ACMSDQ8TDX5 336 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 NCLNQ969V3 563 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 SIGLEC12Q96PQ1 595 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 TMEM237Q96Q45 408 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 FRG2BQ96QU4 278 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 UTP23Q9BRU9 249 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 ERVK-6Q9BXR3 956 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF717Q9BY31 904 aaPredicted RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 DEFB126Q9BYW3 111 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 AGPAT4Q9NRZ5 378 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 FARSBQ9NSD9 589 aaKnown RBP16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 SCN2AQ99250 2005 aa16.97■□□□□ 0.31
PTPRN2-204ENST00000404321 FLNBO75369 2602 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 FOXE1O00358 373 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 TMPRSS11DO60235 418 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 PRAMEF2O60811 474 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 OTCP00480 354 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 TNNI3P19429 210 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ATP5F1P24539 256 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 BSGP35613 385 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 HSD17B3P37058 310 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 CLCQ05315 142 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 CUL3Q13618 768 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 UBAP2LQ14157 1087 aaKnown RBP16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF678Q5SXM1 525 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF468Q5VIY5 522 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 SPINK14Q6IE38 97 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 FAM180AQ6UWF9 173 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 GPR180Q86V85 440 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 LCA5Q86VQ0 697 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 APCDD1LQ8NCL9 501 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 B3GNT7Q8NFL0 401 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 TAAR6Q96RI8 345 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 HES7Q9BYE0 225 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ELOVL6Q9H5J4 265 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ADAP2Q9NPF8 381 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 KLHL1Q9NR64 748 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF223Q9UK11 482 aaPredicted RBP16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 ATG4BQ9Y4P1 393 aa16.96■□□□□ 0.31
PTPRN2-204ENST00000404321 GLOD5A6NK44 160 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 WASHC1A8K0Z3 465 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 FGF17O60258 216 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 OR4F21O95013 312 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 CBX6O95503 412 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 TPP2P29144 1249 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 PMP22Q01453 160 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 IFT88Q13099 833 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 OR1C1Q15619 314 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 ZNF766Q5HY98 468 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 TCHHL1Q5QJ38 904 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 CYP20A1Q6UW02 462 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 ZCCHC7Q8N3Z6 543 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 DOK4Q8TEW6 326 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 FAR1Q8WVX9 515 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 ANKRD9Q96BM1 317 aaPredicted RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 HBEGFQ99075 208 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 BARD1Q99728 777 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 C1QTNF3Q9BXJ4 246 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 MRPL1Q9BYD6 325 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 C12orf65Q9H3J6 166 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 RPF2Q9H7B2 306 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 LIN28AQ9H9Z2 209 aaKnown RBP16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 DCDC2Q9UHG0 476 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 ZNF225Q9UK10 706 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 EMCNQ9ULC0 261 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 CLCA3PQ9Y6N3 262 aa16.95■□□□□ 0.3
PTPRN2-204ENST00000404321 SHANK1Q9Y566 2161 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms