RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 MACC1Q6ZN28 852 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 TEX26Q8N6G2 289 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 OR10H4Q8NGA5 316 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 CREB3L1Q96BA8 519 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 PDLIM5Q96HC4 596 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ASF1AQ9Y294 204 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 PCDH17O14917 1159 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SCAMP2O15127 329 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 MMP2P08253 660 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 OSMP13725 252 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 IGFBP6P24592 240 aaPredicted RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ACRV1P26436 265 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ESCO2Q56NI9 601 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 LIPJQ5W064 366 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 COMMD7Q86VX2 200 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SLITRK4Q8IW52 837 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 NLGN4XQ8N0W4 816 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 TRIB2Q92519 343 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 FAIM2Q9BWQ8 316 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 ALG5Q9Y673 324 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 PRRC2BQ5JSZ5 2229 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 B8ZZF3 427 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 WWP2O00308 870 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SEPT4O43236 478 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 CNMDO75829 334 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SLC10A3P09131 477 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 AMD1P17707 334 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 DOC2AQ14183 400 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 SBSNQ6UWP8 590 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 LINC01465Q8N7H1 131 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 PLD4Q96BZ4 506 aa13.38□□□□□ -0.27
HMGA2-204ENST00000403681 EXOSC1Q9Y3B2 195 aaKnown RBP13.38□□□□□ -0.27
HMGA2-204ENST00000403681 TRIM64A6NGJ6 449 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 KPNA3O00505 521 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 KDM4BO94953 1096 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 GSTM3P21266 225 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 LCN1P31025 176 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 NTRK2Q16620 822 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 NDUFA9Q16795 377 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 NXNL2Q5VZ03 156 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 TRIM46Q7Z4K8 759 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 IQCHQ86VS3 1027 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 IQCF1Q8N6M8 205 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 C1QTNF3Q9BXJ4 246 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SLITRK2Q9H156 845 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 EQTNQ9NQ60 294 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 TNFRSF10DQ9UBN6 386 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SLC19A2O60779 497 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 IL1RNP18510 177 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 RGS8P57771 180 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 TSPAN5P62079 268 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 MTAPQ13126 283 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 ZNF433Q8N7K0 673 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 COL26A1Q96A83 441 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SPG21Q9NZD8 308 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 KIAA1522Q9P206 1035 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 ZNF225Q9UK10 706 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 DAPL1A0PJW8 107 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 L7N2F9 121 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 EIF3FO00303 357 aaPredicted RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 FAAHO00519 579 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 IL1AP01583 271 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 ACVR1Q04771 509 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 PTPRRQ15256 657 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 POU4F3Q15319 338 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 TMEM44Q2T9K0 475 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 ZNF613Q6PF04 617 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SLC24A5Q71RS6 500 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 ADGRG2Q8IZP9 1017 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SRFBP1Q8NEF9 429 aaKnown RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 FAM86C2PA6NEL3 165 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 B3GALT4O96024 378 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 APEX1P27695 318 aaKnown RBP13.37□□□□□ -0.27
HMGA2-204ENST00000403681 TIA1P31483 386 aaKnown RBP eCLIP13.37□□□□□ -0.272e-8■■■■□ 25.2
HMGA2-204ENST00000403681 P2RX3P56373 397 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 PITPNAQ00169 270 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 SLC36A4Q6YBV0 504 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 RNF175Q8N4F7 328 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 NIPSNAP1Q9BPW8 284 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 EFCAB11Q9BUY7 163 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 GABARAPL1Q9H0R8 117 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 NIPAL2Q9H841 368 aa13.37□□□□□ -0.27
HMGA2-204ENST00000403681 MYO10Q9HD67 2058 aa13.36□□□□□ -0.27
HMGA2-204ENST00000403681 ZFC3H1O60293 1989 aaKnown RBP13.36□□□□□ -0.27
HMGA2-204ENST00000403681 SLC9A3R1O14745 358 aaPredicted RBP13.36□□□□□ -0.27
HMGA2-204ENST00000403681 URODP06132 367 aa13.36□□□□□ -0.27
HMGA2-204ENST00000403681 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
HMGA2-204ENST00000403681 RHAGQ02094 409 aa13.36□□□□□ -0.27
HMGA2-204ENST00000403681 C9orf64Q5T6V5 341 aa13.36□□□□□ -0.27
HMGA2-204ENST00000403681 NCEH1Q6PIU2 408 aa13.36□□□□□ -0.27
HMGA2-204ENST00000403681 C17orf64Q86WR6 236 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms