RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 AARDQ4LEZ3 155 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 GCNT7Q6ZNI0 430 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 ARHGAP36Q6ZRI8 547 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 TRAPPC6BQ86SZ2 158 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 RBM23Q86U06 439 aaKnown RBP2.63□□□□□ -1.99
CHD9-202ENST00000398510 ZADH2Q8N4Q0 377 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 CNTD1Q8N815 330 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 KDM1BQ8NB78 822 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 VN1R2Q8NFZ6 395 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 OR52K1Q8NGK4 314 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 OR2T4Q8NH00 348 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 POC1BQ8TC44 478 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 ABHD5Q8WTS1 349 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 SLC35G5Q96KT7 338 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 RNF157Q96PX1 679 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 CDC42EP4Q9H3Q1 356 aaKnown RBP2.63□□□□□ -1.99
CHD9-202ENST00000398510 PTGFRNQ9P2B2 879 aa2.63□□□□□ -1.99
CHD9-202ENST00000398510 ZNF490Q9ULM2 529 aaPredicted RBP2.63□□□□□ -1.99
CHD9-202ENST00000398510 FAM230AA0A1W2PPH8 454 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ANKRD33BA6NCL7 494 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 NKX6-3A6NJ46 265 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 E7ENX8 843 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 EIF1BO60739 113 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 AKAP3O75969 853 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 DIRAS3O95661 229 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 NTSR1P30989 418 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 SLC6A4P31645 630 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 TAS2R46P59540 309 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 TAP2Q03519 686 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ACTBL2Q562R1 376 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 SSX6Q7RTT6 188 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CILP2Q8IUL8 1156 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 SKA3Q8IX90 412 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 HS3ST5Q8IZT8 346 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 AGBL5Q8NDL9 886 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ZNF540Q8NDQ6 660 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 GSTCDQ8NEC7 633 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 RHEBL1Q8TAI7 183 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 SLC25A43Q8WUT9 341 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 CNOT9Q92600 299 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 ASB9Q96DX5 294 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 AURKBQ96GD4 344 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 TCTN2Q96GX1 697 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 JSRP1Q96MG2 331 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 FAM129BQ96TA1 746 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 URM1Q9BTM9 101 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 CDH20Q9HBT6 801 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CCDC167Q9P0B6 97 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ARL5AQ9Y689 179 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CABIN1Q9Y6J0 2220 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 TTC34A8MYJ7 566 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 GPR171O14626 319 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CDC40O60508 579 aaKnown RBP eCLIP2.62□□□□□ -1.99
CHD9-202ENST00000398510 SCN2BO60939 215 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CNTN5O94779 1100 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 MT-CYBP00156 380 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 GATMP50440 423 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 PPT1P50897 306 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 NPRL3Q12980 569 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 AUHQ13825 339 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 RAB11BQ15907 218 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 PLET1Q6UQ28 207 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 FAM83HQ6ZRV2 1179 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 PTCHD4Q6ZW05 846 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 MOB2Q70IA6 237 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CEP97Q8IW35 865 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 SMG8Q8ND04 991 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 FAM83FQ8NEG4 500 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 UBA3Q8TBC4 463 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 OTUD7AQ8TE49 926 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 MYRFLQ96LU7 910 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ZNF382Q96SR6 550 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 TUBA1CQ9BQE3 449 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 RSPH9Q9H1X1 276 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 SUV39H2Q9H5I1 410 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CARS2Q9HA77 564 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 TSC22D4Q9Y3Q8 395 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 RAI2Q9Y5P3 530 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 hCG_2014768A0A024R1R8 64 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ELOVL7A1L3X0 281 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 A8MVJ9 347 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ADM5C9JUS6 153 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 ZNF670-ZNF695F2Z2N8 137 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 GJB3O75712 270 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 H6PDO95479 791 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 IFNA2P01563 188 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 TP53P04637 393 aaPredicted RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 IL3P08700 152 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CSF2RAP15509 400 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 MIPP30301 263 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 PSMB10P40306 273 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CTSKP43235 329 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CLCNKBP51801 687 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CASP9P55211 416 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 NKX3-2P78367 333 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 OASLQ15646 514 aaKnown RBP2.62□□□□□ -1.99
CHD9-202ENST00000398510 PTCHD3Q3KNS1 767 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 KCTD21Q4G0X4 260 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 CFAP206Q8IYR0 622 aa2.62□□□□□ -1.99
CHD9-202ENST00000398510 KIAA0319LQ8IZA0 1049 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms