RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 DSG4Q86SJ6 1040 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 P2RY8Q86VZ1 359 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 P3H2Q8IVL5 708 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 OR9Q2Q8NGE9 314 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TFGQ92734 400 aaPredicted RBP17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RAD51AP1Q96B01 352 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 YIPF6Q96EC8 236 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ALOXE3Q9BYJ1 711 aa17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CUEDC1Q9NWM3 386 aaPredicted RBP17.51■□□□□ 0.39
CHRFAM7A-202ENST00000397827 C21orf33P30042 268 aaPredicted RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TGFBR1P36897 503 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 P2RY2P41231 377 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 IDH2P48735 452 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NCS1P62166 190 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 MVKQ03426 396 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 EEF1A2Q05639 463 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 GANABQ14697 944 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 HEATR4Q86WZ0 1026 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 FAM129CQ86XR2 697 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 OXR1Q8N573 874 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SUN5Q8TC36 379 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CXorf40AQ8TE69 158 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RPL3LQ92901 407 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PPP1R16AQ96I34 528 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 C5AR2Q9P296 337 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 MOSPD1Q9UJG1 213 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RAB23Q9ULC3 237 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PNMA8BQ9ULN7 279 aaPredicted RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 LOC105371267A0A1B0GV96 52 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 FEZF1A0PJY2 475 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PLPP1O14494 284 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 KMOO15229 486 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PCCBP05166 539 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PTX3P26022 381 aaPredicted RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PSMB5P28074 263 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ST13P50502 369 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CARTPTQ16568 116 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 C10orf62Q5T681 223 aaPredicted RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SIGIRRQ6IA17 410 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PRSS48Q7RTY5 328 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SLC9B2Q86UD5 537 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 AMZ2Q86W34 360 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 LGI4Q8N135 537 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PROX1Q92786 737 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 F2RL3Q96RI0 385 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PRDM8Q9NQV8 689 aa17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 FBXO9Q9UK97 447 aaPredicted RBP17.5■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TRPM6Q9BX84 2022 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 E9PQ18 207 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 M0R129 80 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CNTN1Q12860 1018 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 FADDQ13158 208 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CCDC103Q8IW40 242 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ANKRD53Q8N9V6 530 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 OR4C15Q8NGM1 316 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SH3YL1Q96HL8 342 aaPredicted RBP17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TMEM245Q9H330 911 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TMEM38AQ9H6F2 299 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CXorf36Q9H7Y0 433 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RHCGQ9UBD6 479 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TBC1D3BA6NDS4 549 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 M0R3G1 203 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PCDH17O14917 1159 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 VEGFDO43915 354 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RPL3P39023 403 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 IL12RB1P42701 662 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ALDH9A1P49189 494 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NUDT6P53370 316 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RBBP4Q09028 425 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 INAVAQ3KP66 663 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ADGRD2Q7Z7M1 963 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 PDZD3Q86UT5 571 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SVOPQ8N4V2 548 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SETD7Q8WTS6 366 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 CCNB1IP1Q9NPC3 277 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SLAMF7Q9NQ25 335 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SZT2Q5T011 3432 aa17.49■□□□□ 0.39
CHRFAM7A-202ENST00000397827 NFATC1O95644 943 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 RB1P06400 928 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 EPHX1P07099 455 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ALOX5P09917 674 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 KELP23276 732 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 OCA2Q04671 838 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 FPGSQ05932 587 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SYT16Q17RD7 645 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 MICAQ29983 383 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 LCTLQ6UWM7 567 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 UNC5DQ6UXZ4 953 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SLC44A2Q8IWA5 706 aaPredicted RBP17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ADGRF3Q8IZF5 1079 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 UTP15Q8TED0 518 aaKnown RBP17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 UBE2E3Q969T4 207 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ZNF347Q96SE7 839 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 COPS4Q9BT78 406 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 GPSM3Q9Y4H4 160 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 TRANK1O15050 2925 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 ANKDD1BA6NHY2 528 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 SLC22A1O15245 554 aa17.48■□□□□ 0.39
CHRFAM7A-202ENST00000397827 GGT2P36268 569 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms