RNA–Protein interactions for RNA: ENST00000395789.5

C6orf48-209, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 3 BASIC

Gene C6orf48, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-209ENST00000395789 SNX6Q9UNH7 406 aa12.49□□□□□ -0.41
C6orf48-209ENST00000395789 STK38LQ9Y2H1 464 aa12.49□□□□□ -0.41
C6orf48-209ENST00000395789 ATG4BQ9Y4P1 393 aa12.49□□□□□ -0.41
C6orf48-209ENST00000395789 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
C6orf48-209ENST00000395789 CPAMD8Q8IZJ3 1885 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 A0A1W2PR48 441 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 SERTM1A2A2V5 107 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 WASHC1A8K0Z3 465 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PROM1O43490 865 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 CTNSO60931 367 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 KRT6AP02538 564 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 GBAP04062 536 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 KRT6BP04259 564 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 BPGMP07738 259 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 ITGAMP11215 1152 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 H2AFXP16104 143 aaPredicted RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 ITGA3P26006 1051 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 SERPINB3P29508 390 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PPP2R1BP30154 601 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 SOX11P35716 441 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 KRT6CP48668 564 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 GPR143P51810 404 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PGDP52209 483 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 IGLV3-21P80748 117 aaPredicted RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 NFATC3Q12968 1075 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 VWA5B1Q5TIE3 1220 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 C18orf63Q68DL7 685 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PLAG1Q6DJT9 500 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PAPD4Q6PIY7 484 aaKnown RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 IGFL3Q6UXB1 125 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 ASB18Q6ZVZ8 466 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 CROCCP2Q86T23 111 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 NUDT13Q86X67 352 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PTRH1Q86Y79 214 aaKnown RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 CHTF18Q8WVB6 975 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 UCN3Q969E3 161 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 ANKRD9Q96BM1 317 aaPredicted RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 THOC3Q96J01 351 aaKnown RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 ACPTQ9BZG2 426 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 LHPPQ9H008 270 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 TMBIM4Q9HC24 238 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 ADAM29Q9UKF5 820 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 FBXW2Q9UKT8 454 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 SLC12A4Q9UP95 1085 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PCDHGB7Q9Y5F8 929 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
C6orf48-209ENST00000395789 NBASA2RRP1 2371 aa12.48□□□□□ -0.41
C6orf48-209ENST00000395789 HELZ2Q9BYK8 2649 aaKnown RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 ULK1O75385 1050 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 PRKRAO75569 313 aaKnown RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 CHRNGP07510 517 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 FAM58BPP0C7Q3 252 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 HSD3B1P14060 373 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 HSD3B2P26439 372 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 OR4D2P58180 307 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 RAE1P78406 368 aaKnown RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 TNFRSF17Q02223 184 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 ZNF33BQ06732 778 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 H3F3CQ6NXT2 135 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 ZCCHC23Q6ZST2 131 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 COMMD6Q7Z4G1 85 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 CLNKQ7Z7G1 428 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 GPR180Q86V85 440 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 RBMXL3Q8N7X1 1067 aaKnown RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 BRIX1Q8TDN6 353 aaKnown RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 TLCD1Q96CP7 247 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 NPAS2Q99743 824 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 CENPKQ9BS16 269 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 TRMOQ9BU70 441 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 SHCBP1LQ9BZQ2 653 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 TEX10Q9NXF1 929 aaPredicted RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 C5AR2Q9P296 337 aa12.47□□□□□ -0.41
C6orf48-209ENST00000395789 PPIEQ9UNP9 301 aaKnown RBP12.47□□□□□ -0.41
C6orf48-209ENST00000395789 MYOCOSA0A1B0GUC4 107 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 B8ZZF3 427 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 H3BQF6 201 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 CLDN4O14493 209 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 SUV39H1O43463 412 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 FGF17O60258 216 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 NPHS1O60500 1241 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 LDB3O75112 727 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 AIFM1O95831 613 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 KLK1P06870 262 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 FGF4P08620 206 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 CPN2P22792 545 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 HMOX2P30519 316 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 SERPINB4P48594 390 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 SLC26A5P58743 744 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 HMGCS1Q01581 520 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 CSTF3Q12996 717 aaKnown RBP12.46□□□□□ -0.41
C6orf48-209ENST00000395789 SLC13A2Q13183 592 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 RCN2Q14257 317 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 UGT3A2Q3SY77 523 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 ARL13AQ5H913 290 aaPredicted RBP12.46□□□□□ -0.41
C6orf48-209ENST00000395789 CFAP157Q5JU67 520 aa12.46□□□□□ -0.41
C6orf48-209ENST00000395789 COLEC12Q5KU26 742 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms