RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 TTYH2Q9BSA4 534 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 MAGIXQ9H6Y5 334 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 DMRT3Q9NQL9 472 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 OR1A2Q9Y585 309 aa13.1□□□□□ -0.31
CCDC142-202ENST00000393965 DOCK8Q8NF50 2099 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SCN2AQ99250 2005 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SERTM1A2A2V5 107 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 M0QX08 132 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 ALPPL2P10696 532 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 CHI3L1P36222 383 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 ST3GAL4Q11206 333 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 NPRL3Q12980 569 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 OXA1LQ15070 435 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 CBLL1Q75N03 491 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 AMER3Q8N944 861 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 FGF13Q92913 245 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 GPN2Q9H9Y4 310 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 C8orf4Q9NR00 106 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 DNAJC27Q9NZQ0 273 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 RNF6Q9Y252 685 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 ASF1AQ9Y294 204 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 LOC110117498-PIK3R3F6TDL0 507 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 UGDHO60701 494 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 EPHX1P07099 455 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SRPRAP08240 638 aaKnown RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 ACADLP28330 430 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PBX2P40425 430 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SOX3P41225 446 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 RNF144AP50876 292 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 KCNC3Q14003 757 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 TANGO2Q6ICL3 276 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 CCBE1Q6UXH8 406 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SLC34A3Q8N130 599 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 FOPNLQ96NB1 174 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 OR5M11Q96RB7 305 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 DOK1Q99704 481 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 MBNL1Q9NR56 388 aaKnown RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SAMD4AQ9UPU9 718 aaKnown RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PLEKHM1Q9Y4G2 1056 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 CACNA1CQ13936 2221 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 IGLON5A6NGN9 336 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 TSC22D2O75157 780 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SNX4O95219 450 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PTHP01270 115 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 HOXB3P14651 431 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 PCMT1P22061 227 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 RACK1P63244 317 aaKnown RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 CAPN13Q6MZZ7 669 aaPredicted RBP13.09□□□□□ -0.31
CCDC142-202ENST00000393965 TTC23LQ6PF05 361 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 FAM124AQ86V42 546 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 ARMC8Q8IUR7 673 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 OR9A1PQ8NGU1 263 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 NFKBIDQ8NI38 313 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 RAB8BQ92930 207 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 NIPSNAP1Q9BPW8 284 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 TUBA1CQ9BQE3 449 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 F5P12259 2224 aa13.09□□□□□ -0.31
CCDC142-202ENST00000393965 SCN3AQ9NY46 2000 aa13.08□□□□□ -0.31
CCDC142-202ENST00000393965 ZNF701M0R085 212 aaPredicted RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 KRT75O95678 551 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 IL3P08700 152 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 C1GALT1C1LP0DN25 315 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 TNNI3P19429 210 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 ITGB7P26010 798 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 SOX9P48436 509 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 SELENBP1Q13228 472 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 HIST2H2ACQ16777 129 aaPredicted RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 ZNF404Q494X3 552 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 DEPDC1Q5TB30 811 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 RNF130Q86XS8 419 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 ANKRD53Q8N9V6 530 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 OR6Q1Q8NGQ2 317 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 C16orf78Q8WTQ4 265 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 ASB16Q96NS5 453 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 SLAMF7Q9NQ25 335 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 MS4A12Q9NXJ0 267 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 DEC1Q9P2X7 70 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 NFKBIL1Q9UBC1 381 aaPredicted RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 FAM32AQ9Y421 112 aaKnown RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 TBC1D3BA6NDS4 549 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 HOXC11O43248 304 aaPredicted RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 PNLIPRP1P54315 467 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 PRKAG1P54619 331 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 SLC5A12Q1EHB4 618 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 RPS26P11Q5JNZ5 115 aaPredicted RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 EIF3MQ7L2H7 374 aaKnown RBP13.08□□□□□ -0.32
CCDC142-202ENST00000393965 ADGRF3Q8IZF5 1079 aa13.08□□□□□ -0.32
CCDC142-202ENST00000393965 ZFP41Q8N8Y5 198 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms