RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 C17orf64Q86WR6 236 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 CCDC36Q8IYA8 594 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 ZCCHC3Q9NUD5 404 aaKnown RBP13.68□□□□□ -0.22
RTF1-201ENST00000389629 NEDD8-MDP1E9PL57 170 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 CBSLP0DN79 551 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 CBSP35520 551 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 FLYWCH1Q4VC44 716 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 ZDHHC20Q5W0Z9 365 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 AGTRAPQ6RW13 159 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 TOR1AIP2Q8NFQ8 470 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 DNAJA4Q8WW22 397 aaPredicted RBP13.68□□□□□ -0.22
RTF1-201ENST00000389629 RHBDF1Q96CC6 855 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 AP2M1Q96CW1 435 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 MED30Q96HR3 178 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 MGME1Q9BQP7 344 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 FBXO8Q9NRD0 319 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 MKL2Q9ULH7 1088 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
RTF1-201ENST00000389629 DRD5P21918 477 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 HNF1BP35680 557 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 RPL34P49207 117 aaKnown RBP13.68□□□□□ -0.22
RTF1-201ENST00000389629 CTF1Q16619 201 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 CTSL3PQ5NE16 218 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 PLAG1Q6DJT9 500 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 OR8J1Q8NGP2 316 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 OR5M11Q96RB7 305 aa13.68□□□□□ -0.22
RTF1-201ENST00000389629 MRPL15Q9P015 296 aaKnown RBP13.68□□□□□ -0.22
RTF1-201ENST00000389629 WASH4PA8MWX3 477 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 TTC34A8MYJ7 566 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 K7ERQ8 282 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 CAPN5O15484 640 aaPredicted RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 EOMESO95936 686 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 SDC1P18827 310 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 ZNF630Q2M218 657 aaPredicted RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 SPIN4Q56A73 249 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 SLC25A25Q6KCM7 469 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 C1orf216Q8TAB5 229 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 ACPTQ9BZG2 426 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 MAU2Q9Y6X3 613 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 MANSC4A6NHS7 340 aaPredicted RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 HHLA1C9JL84 531 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 WWP2O00308 870 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 PCDH8O95206 1070 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 CYP17A1P05093 508 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 ATP1B2P14415 290 aaPredicted RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 HMGCLP35914 325 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 CCR4P51679 360 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 AP3S2P59780 193 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 SLC35A2P78381 396 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 RING1Q06587 406 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 PTGES3Q15185 160 aaKnown RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 NCEH1Q6PIU2 408 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 PLCZ1Q86YW0 608 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 RIT1Q92963 219 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 SUV39H2Q9H5I1 410 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 PCDHGA12O60330 932 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 ACRV1P26436 265 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 FAUP35544 74 aaKnown RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 XAF1Q6GPH4 301 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 SLC46A3Q7Z3Q1 461 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 NLGN4XQ8N0W4 816 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 FTMTQ8N4E7 242 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 LINC01465Q8N7H1 131 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 OR2T35Q8NGX2 323 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 ADAMTS15Q8TE58 950 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 CLMPQ9H6B4 373 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 NUDT15Q9NV35 164 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 STON1Q9Y6Q2 735 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 ARHGAP33O14559 1287 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 PCDH17O14917 1159 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 SLC16A6O15403 523 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 HCN1O60741 890 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 TGM1P22735 817 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 FLT3LGP49771 235 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 GPRC6AQ5T6X5 926 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 PXDC1Q5TGL8 231 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 DNAJC22Q8N4W6 341 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 OR51G2Q8NGK0 314 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 WRAP53Q9BUR4 548 aaKnown RBP13.67□□□□□ -0.22
RTF1-201ENST00000389629 CACNG6Q9BXT2 260 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 FOLH1BQ9HBA9 442 aa13.67□□□□□ -0.22
RTF1-201ENST00000389629 HPGDP15428 266 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 PITPNAQ00169 270 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 MEF2AQ02078 507 aaPredicted RBP13.66□□□□□ -0.22
RTF1-201ENST00000389629 KCNC4Q03721 635 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 FAM180AQ6UWF9 173 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ADGRG2Q8IZP9 1017 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 ZNF366Q8N895 744 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 FAM170BA6NMN3 283 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 J3QLW9 94 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 OR7A17O14581 309 aa13.66□□□□□ -0.22
RTF1-201ENST00000389629 SLC9A3R1O14745 358 aaPredicted RBP13.66□□□□□ -0.22
RTF1-201ENST00000389629 POP4O95707 220 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms