RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 OAFQ86UD1 273 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 KLHDC8AQ8IYD2 350 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 DGAT2Q96PD7 388 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 OR8D2Q9GZM6 311 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 COPS7AQ9UBW8 275 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 PRLP01236 227 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MTHFD2P13995 350 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 SMSP52788 366 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 GINS1Q14691 196 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 GALNT7Q86SF2 657 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 SETD7Q8WTS6 366 aaKnown RBP12.63□□□□□ -0.39
NPHP4-203ENST00000378169 HDAC2Q92769 488 aaKnown RBP12.63□□□□□ -0.39
NPHP4-203ENST00000378169 DNAJA3Q96EY1 480 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 ITPAQ9BY32 194 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 RDH14Q9HBH5 336 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 ARMC1Q9NVT9 282 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MS4A12Q9NXJ0 267 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MKLN1Q9UL63 735 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 RBMX2Q9Y388 322 aaKnown RBP12.63□□□□□ -0.39
NPHP4-203ENST00000378169 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 ANHXE9PGG2 379 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MT-ND2P03891 347 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MYOGP15173 224 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 MASP1P48740 699 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 DHPSP49366 369 aaPredicted RBP12.63□□□□□ -0.39
NPHP4-203ENST00000378169 CDH11P55287 796 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 RBBP4Q09028 425 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 KHDRBS2Q5VWX1 349 aaKnown RBP12.63□□□□□ -0.39
NPHP4-203ENST00000378169 OR2T11Q8NH01 316 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 GTF2H4Q92759 462 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 UFD1Q92890 307 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 GATA6Q92908 595 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 HHIPL1Q96JK4 782 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 RDH12Q96NR8 316 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 OR51I1Q9H343 314 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 CDH7Q9ULB5 785 aa12.63□□□□□ -0.39
NPHP4-203ENST00000378169 SLC35F4A4IF30 521 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 PCDHGA12O60330 932 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 CKMT1AP12532 417 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ITGB7P26010 798 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 CD47Q08722 323 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 NDUFAF5Q5TEU4 345 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 TLDC1Q6P9B6 456 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ARL9Q6T311 187 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ASPGQ86U10 573 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 TRIM73Q86UV7 250 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 VRK3Q8IV63 474 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 C7orf57Q8NEG2 295 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 NUP43Q8NFH3 380 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 TMEM19Q96HH6 336 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 S100A13Q99584 98 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 TTTY10Q9BZA0 68 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 EHD1Q9H4M9 534 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 AASSQ9UDR5 926 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 MVKQ03426 396 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 CBX3Q13185 183 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 CAMK1Q14012 370 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 SH2D5Q6ZV89 423 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 FUNDC1Q8IVP5 155 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 LILRA2Q8N149 483 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 Q8N9G6 341 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 OR10H5Q8NGA6 315 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 MKKSQ9NPJ1 570 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 NECTIN3Q9NQS3 549 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 MAN2B2Q9Y2E5 1009 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ELOA3DA6NLF2 546 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ACOX3O15254 700 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 UBXN7O94888 489 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 HMGN1P05114 100 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 IFI30P13284 250 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 EN2P19622 333 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 LHCGRP22888 699 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 AK4P27144 223 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 PSMB5P28074 263 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ENPP2Q13822 863 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ELOA3BQ3SY89 546 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 MLIPQ5VWP3 458 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 DPPA4Q7L190 304 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 GATSQ8NAP1 163 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ELOA3Q8NG57 546 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ISL2Q96A47 359 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 MMABQ96EY8 250 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 SH3YL1Q96HL8 342 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-203ENST00000378169 ZFP3Q96NJ6 502 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 SAMD11Q96NU1 681 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 CDADC1Q9BWV3 514 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 TBL1XR1Q9BZK7 514 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 HEBP1Q9NRV9 189 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 HSFX1Q9UBD0 423 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 RIMS3Q9UJD0 308 aa12.62□□□□□ -0.39
NPHP4-203ENST00000378169 FAM92AA1XBS5 289 aa12.61□□□□□ -0.39
NPHP4-203ENST00000378169 ZNF821O75541 412 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-203ENST00000378169 PRKAR1AP10644 381 aa12.61□□□□□ -0.39
NPHP4-203ENST00000378169 SLC9A3P48764 834 aa12.61□□□□□ -0.39
NPHP4-203ENST00000378169 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
NPHP4-203ENST00000378169 MRPL58Q14197 206 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms