RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 UFM1P61960 85 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 SERINC3Q13530 473 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 IRF5Q13568 498 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 LDLRAD1Q5T700 205 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 DPY19L3Q6ZPD9 716 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 MMABQ96EY8 250 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 HSH2DQ96JZ2 352 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 CD180Q99467 661 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF395Q9H8N7 513 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 OR2S2Q9NQN1 319 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 SOX1O00570 391 aaPredicted RBP13.79□□□□□ -0.2
TRAF1-201ENST00000373887 PRAMEF11O60813 436 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ARL6IP5O75915 188 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 GSTT2P0CG29 244 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 EDNRBP24530 442 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ACADVLP49748 655 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ELOCQ15369 112 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 DHCR24Q15392 516 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF225Q9UK10 706 aa13.79□□□□□ -0.2
TRAF1-201ENST00000373887 A0A1W2PQU0 124 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 OR6C74A6NCV1 312 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 LOC730098B7Z3J9 87 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 GTF2F2P13984 249 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF30P17039 623 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 IMPDH1P20839 514 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 HOXD13P35453 343 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 RPS13P62277 151 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ZBED5Q49AG3 693 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF283Q8N7M2 679 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 OR6N2Q8NGY6 317 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 FCAMRQ8WWV6 532 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ALPK1Q96QP1 1244 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 KCNH6Q9H252 994 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 NUFIP1Q9UHK0 495 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 FAM208AQ9UK61 1670 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 COQ9O75208 318 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 JUNDP17535 347 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 RBMXP38159 391 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 RPS21P63220 83 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 GATSQ8NAP1 163 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 C10orf82Q8WW14 230 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PKP2Q99959 881 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ATG5Q9H1Y0 275 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 GALPQ9UBC7 116 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PCDHGA6Q9Y5G7 932 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 AGPSO00116 658 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PLD2O14939 933 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ASTE1Q2TB18 679 aaPredicted RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ADGRD2Q7Z7M1 963 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 OSBPL7Q9BZF2 842 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 SCP2D1Q9UJQ7 156 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PROM1O43490 865 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 FARS2O95363 451 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 SCNN1AP37088 669 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 DECR1Q16698 335 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF805Q5CZA5 627 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 GTF2IRD2BQ6EKJ0 949 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 GTF2IRD2Q86UP8 949 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 APCDD1Q8J025 514 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM74Q96NL1 305 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 STRADBQ9C0K7 418 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 NSUN3Q9H649 340 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 A0A0A6YYH2 397 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 A6NJ64 397 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 CFL1P23528 166 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 EEFSECP57772 596 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 CDK6Q00534 326 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 SLC36A4Q6YBV0 504 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ZNF550Q7Z398 422 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 GOLGA7Q7Z5G4 137 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 DNAJB8Q8NHS0 232 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 KIAA1143Q96AT1 154 aaPredicted RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 CMTM7Q96FZ5 175 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PYURFQ96I23 114 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PFDN5Q99471 154 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 CGREF1Q99674 301 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 CMKLR1Q99788 373 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 OR8D2Q9GZM6 311 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 THUMPD1Q9NXG2 353 aaKnown RBP13.78□□□□□ -0.2
TRAF1-201ENST00000373887 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 OR1A2Q9Y585 309 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 MAB21L2Q9Y586 359 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 ST14Q9Y5Y6 855 aa13.78□□□□□ -0.2
TRAF1-201ENST00000373887 PDYNP01213 254 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 HLA-DPB1P04440 258 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 FHP07954 510 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 ANXA3P12429 323 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 EN2P19622 333 aaPredicted RBP13.77□□□□□ -0.2
TRAF1-201ENST00000373887 RAB4BP61018 213 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 OR52B2Q96RD2 323 aa13.77□□□□□ -0.2
TRAF1-201ENST00000373887 TMEM109Q9BVC6 243 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms