RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 ST14Q9Y5Y6 855 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 NUDT7P0C024 238 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 RPS3AP61247 264 aaKnown RBP13.68□□□□□ -0.22
LMX1B-202ENST00000373474 MEDAGQ5VYS4 303 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 KCTD9Q7L273 389 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 ANKRD13BQ86YJ7 626 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 TICAM1Q8IUC6 712 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 PROKR2Q8NFJ6 384 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 CRYGNQ8WXF5 182 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 CCDC32Q9BV29 185 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 TSSK6Q9BXA6 273 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 CLCNKAP51800 687 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 SLC16A9Q7RTY1 509 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 COMMD7Q86VX2 200 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 MMAAQ8IVH4 418 aaKnown RBP13.68□□□□□ -0.22
LMX1B-202ENST00000373474 CAMKVQ8NCB2 501 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 OSTF1Q92882 214 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 GIMAP5Q96F15 307 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 HERPUD2Q9BSE4 406 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 ERVK-18Q9QC07 812 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 RHCGQ9UBD6 479 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF705EA8MWA4 302 aaPredicted RBP13.68□□□□□ -0.22
LMX1B-202ENST00000373474 F5H0A9 414 aaPredicted RBP13.68□□□□□ -0.22
LMX1B-202ENST00000373474 GRID2O43424 1007 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 HSD3B1P14060 373 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 MYF6P23409 242 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 ADH6P28332 368 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 SLC3A1Q07837 685 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 DNM1P34Q6PK57 102 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 SCGB1C1Q8TD33 95 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 SLC38A3Q99624 504 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 PCDHB11Q9Y5F2 797 aa13.68□□□□□ -0.22
LMX1B-202ENST00000373474 PLATP00750 562 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 CHRNA1P02708 482 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 DHRS4L1P0CG22 281 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 TSPAN33Q86UF1 283 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 TMEM145Q8NBT3 493 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 RPLP0P6Q8NHW5 317 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 DOHHQ9BU89 302 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 CARS2Q9HA77 564 aaKnown RBP13.67□□□□□ -0.22
LMX1B-202ENST00000373474 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 ERVK-19Q9WJR5 959 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 J3QLW9 94 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 CRYZL1O95825 349 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 GBAP04062 536 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF19P17023 458 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 RING1Q06587 406 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 CDK10Q15131 360 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 OR4D1Q15615 310 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 ALG10BQ5I7T1 473 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 LCN8Q6JVE9 175 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 CNKSR3Q6P9H4 555 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 ADAD1Q96M93 576 aaKnown RBP13.67□□□□□ -0.22
LMX1B-202ENST00000373474 DGAT2Q96PD7 388 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 FAM118AQ9NWS6 357 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 NLGN3Q9NZ94 848 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 TRAV6A0A075B6T7 132 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 G3V2L1 256 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 RFC2P35250 354 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 HLCSP50747 726 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 DGKEP52429 567 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 LSAMPQ13449 338 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 ABRAXAS2Q15018 415 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 C10orf62Q5T681 223 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-202ENST00000373474 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 MOAP1Q96BY2 351 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-202ENST00000373474 SMURF1Q9HCE7 757 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 PLAGL1Q9UM63 463 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 C4AP0C0L4 1744 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 TVP23AA6NH52 213 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 IFNA10P01566 189 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 BMP8BP34820 402 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 HNF1BP35680 557 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 PRMT2P55345 433 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 SOX4Q06945 474 aaPredicted RBP13.67□□□□□ -0.22
LMX1B-202ENST00000373474 ENPP7Q6UWV6 458 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 BMP8AQ7Z5Y6 402 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 IL12RB2Q99665 862 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
LMX1B-202ENST00000373474 IGKV6D-21A0A0A0MT36 114 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 A8MV72 311 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CH25HO95992 272 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 ZNF8P17098 575 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 RBMXP38159 391 aaKnown RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 ENPP2Q13822 863 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 UGT8Q16880 541 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 RAB6CQ53S08 254 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CELF5Q8N6W0 485 aaKnown RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 TFGQ92734 400 aaPredicted RBP13.66□□□□□ -0.22
LMX1B-202ENST00000373474 GMLQ99445 158 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 CD180Q99467 661 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 RAB6CQ9H0N0 254 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 IGSF5Q9NSI5 407 aa13.66□□□□□ -0.22
LMX1B-202ENST00000373474 WASF3Q9UPY6 502 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms