RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 FAR1Q8WVX9 515 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 RGMAQ96B86 450 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 REPS1Q96D71 796 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 CDK15Q96Q40 435 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 SLX1AQ9BQ83 275 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 SLC29A3Q9BZD2 475 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 TRIM45Q9H8W5 580 aaPredicted RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF225Q9UK10 706 aa19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 MRPS33Q9Y291 106 aaKnown RBP19.19■□□□□ 0.66
SMNDC1-201ENST00000369592 IQANK1A0A1B0GTG1 560 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 SYNDIG1LA6NDD5 238 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 SAP18O00422 153 aaKnown RBP19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 PPP6CO00743 305 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 F10P00742 488 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 BSGP35613 385 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 CD96P40200 585 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 TUBA3CQ13748 450 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 DDX39BQ13838 428 aaKnown RBP19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 RASA2Q15283 850 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 NR6A1Q15406 480 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 TUBA3EQ6PEY2 450 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 RPS27LQ71UM5 84 aaKnown RBP19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 TDRPQ86YL5 185 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 CYP4X1Q8N118 509 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 SLC5A8Q8N695 610 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 B3GNT7Q8NFL0 401 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 ANKRD9Q96BM1 317 aaPredicted RBP19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 DDX31Q9H8H2 851 aaKnown RBP19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 ADAP2Q9NPF8 381 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 VTI1BQ9UEU0 232 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 DOPEY1Q5JWR5 2465 aa19.18■□□□□ 0.66
SMNDC1-201ENST00000369592 ICE1Q9Y2F5 2266 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 A0A0A6YYD5 115 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 BLACEA4D250 179 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 A8MUA0 341 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 DLX3O60479 287 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 PRAMEF2O60811 474 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 GSTA1P08263 222 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 SSR2P43308 183 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 NEK2P51955 445 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 MLF1P58340 268 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 SLC13A2Q13183 592 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 C10orf62Q5T681 223 aaPredicted RBP19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 RPS19BP1Q86WX3 136 aaKnown RBP19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF227Q86WZ6 799 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 MYLK4Q86YV6 388 aaPredicted RBP19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 ST6GALNAC3Q8NDV1 305 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 MYRIPQ8NFW9 859 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 PTPMT1Q8WUK0 201 aaPredicted RBP19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 SIGLEC12Q96PQ1 595 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 AGPAT4Q9NRZ5 378 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 EMCNQ9ULC0 261 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 ASB4Q9Y574 426 aa19.17■□□□□ 0.66
SMNDC1-201ENST00000369592 A0A1W2PPM1 405 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 TMEM200CA6NKL6 621 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF500O60304 480 aaPredicted RBP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 EEDO75530 441 aaKnown RBP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 MYO1DO94832 1006 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 SEMA3DO95025 777 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 TRHRP34981 398 aaPredicted RBP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 TDGF1P3P51864 188 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 CCNG1P51959 295 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 HNRNPH2P55795 449 aaKnown RBP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 TAS2R50P59544 299 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 HERVK_113P63132 956 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 SLAMF1Q13291 335 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 ELAVL1Q15717 326 aaKnown RBP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 UNC50Q53HI1 259 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF468Q5VIY5 522 aaPredicted RBP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 FRG2Q64ET8 278 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 LETMD1Q6P1Q0 360 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 CLNKQ7Z7G1 428 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 OR4F6Q8NGB9 312 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 SCMH1Q96GD3 660 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 FRG2BQ96QU4 278 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 ERVK-6Q9BXR3 956 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 CDCP1Q9H5V8 836 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 ATG4BQ9Y4P1 393 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 NBPF19A0A087WUL8 3843 aa19.16■□□□□ 0.66
SMNDC1-201ENST00000369592 GABRR3A8MPY1 467 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 PROM1O43490 865 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 TMPRSS11DO60235 418 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 NEURL1O76050 574 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 PYGBP11216 843 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 TPP2P29144 1249 aaPredicted RBP19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 HSD17B3P37058 310 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 CDH13P55290 713 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 EIF2S3LQ2VIR3 472 aaKnown RBP19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 ZNF678Q5SXM1 525 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 MAGEB10Q96LZ2 347 aaPredicted RBP19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 CCDC77Q9BR77 488 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 ALOXE3Q9BYJ1 711 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 PPCSQ9HAB8 311 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 SEMA4BQ9NPR2 832 aaPredicted RBP19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 PNO1Q9NRX1 252 aaKnown RBP19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 MS4A12Q9NXJ0 267 aa19.15■□□□□ 0.66
SMNDC1-201ENST00000369592 ANKUB1A6NFN9 424 aa19.14■□□□□ 0.65
SMNDC1-201ENST00000369592 FOXO6A8MYZ6 492 aa19.14■□□□□ 0.65
SMNDC1-201ENST00000369592 GOLGA8RI6L899 631 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms