RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 KRT78Q8N1N4 520 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 MCFD2Q8NI22 146 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 SETD7Q8WTS6 366 aaKnown RBP17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 UCN3Q969E3 161 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 UBE2E3Q969T4 207 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 ZNF707Q96C28 371 aaPredicted RBP17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 NEURL2Q9BR09 285 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 FBXO8Q9NRD0 319 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 SLC27A6Q9Y2P4 619 aa17.25■□□□□ 0.35
UBQLN4-201ENST00000368309 PTHP01270 115 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 CD300CQ08708 224 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 CNTN1Q12860 1018 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 LEXMQ3ZCV2 418 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 C10orf62Q5T681 223 aaPredicted RBP17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 C17orf64Q86WR6 236 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 ETFBKMTQ8IXQ9 262 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 TMIEQ8NEW7 156 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 ZNF675Q8TD23 568 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 LINC00615Q96LM1 132 aaPredicted RBP17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 RSPO3Q9BXY4 272 aaPredicted RBP17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 GPR34Q9UPC5 381 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 ENPP4Q9Y6X5 453 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 PTPRSQ13332 1948 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 LRRK1Q38SD2 2015 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 CCNB2O95067 398 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 PCCBP05166 539 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 DBTP11182 482 aaKnown RBP17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 UQCRC2P22695 453 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 TMC5Q6UXY8 1006 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 TAGAPQ8N103 731 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 SLC38A5Q8WUX1 472 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 MROQ9BYG7 248 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 PLCXD1Q9NUJ7 323 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 OSGIN1Q9UJX0 560 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 NUMA1Q14980 2115 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 EDDM13A0A1B0GTR0 161 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 KRBA1A5PL33 1030 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 HOXC11O43248 304 aaPredicted RBP17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 GABRB1P18505 474 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 KELP23276 732 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 DPTQ07507 201 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 REEP3Q6NUK4 255 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 HEATR4Q86WZ0 1026 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 EXOSC8Q96B26 276 aaKnown RBP17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 MTERF3Q96E29 417 aa17.24■□□□□ 0.35
UBQLN4-201ENST00000368309 WASHC1A8K0Z3 465 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 FFAR1O14842 300 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 IFNW1P05000 195 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 LIM2P55344 173 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 KCNC4Q03721 635 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 DEPDC1Q5TB30 811 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 WASH2PQ6VEQ5 465 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 ERN2Q76MJ5 926 aaKnown RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 CXorf40AQ8TE69 158 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 TM4SF18Q96CE8 201 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 ZNF717Q9BY31 904 aaPredicted RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 OR51E2Q9H255 320 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 DSN1Q9H410 356 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 EPS8L2Q9H6S3 715 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 XIRP2A4UGR9 3374 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 MTCL1Q9Y4B5 1905 aaKnown RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 C5orf58C9J3I9 102 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 GRK3P35626 688 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 TBCEQ15813 527 aaPredicted RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 KHDRBS2Q5VWX1 349 aaKnown RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 PDZD3Q86UT5 571 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 B3GNT7Q8NFL0 401 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 PSMA8Q8TAA3 256 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 RAD9AQ99638 391 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 DNAH14Q0VDD8 3507 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 TRBV4-1A0A0J9YWV2 114 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 STATHP02808 62 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 SERPIND1P05546 499 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 DDCP20711 480 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 VASPP50552 380 aaPredicted RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 KLHL17Q6TDP4 642 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 LCTLQ6UWM7 567 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 ZNF765Q7L2R6 523 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 SZRD1Q7Z422 152 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 DEPDC4Q8N2C3 294 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 FCGR1BQ92637 280 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 C6orf62Q9GZU0 229 aaPredicted RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 NMNAT1Q9HAN9 279 aaPredicted RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 CHCHD3Q9NX63 227 aaKnown RBP17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 AHSPQ9NZD4 102 aa17.23■□□□□ 0.35
UBQLN4-201ENST00000368309 PLXND1Q9Y4D7 1925 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 PPM1DO15297 605 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 VEGFDO43915 354 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 IGFBP1P08833 259 aaPredicted RBP17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 ADRA2AP08913 450 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 ADORA3P0DMS8 318 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 PORP16435 677 aaPredicted RBP17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 P2RY2P41231 377 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 CD97P48960 835 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 PXNP49023 591 aaPredicted RBP17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 ARMCX4Q5H9R4 360 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 UNC5DQ6UXZ4 953 aa17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 RBM45Q8IUH3 476 aaKnown RBP17.22■□□□□ 0.35
UBQLN4-201ENST00000368309 DENND6BQ8NEG7 585 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms