RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CHMP2AO43633 222 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 BMP10O95393 424 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 AHSA1O95433 338 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 MBD3O95983 291 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TRBC1P01850 177 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 IL6RP08887 468 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM58BPP0C7Q3 252 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TMEM225BP0DP42 221 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CD19P15391 556 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 RPA2P15927 270 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ITGB6P18564 788 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SRMP19623 302 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NT5EP21589 574 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 MSR1P21757 451 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 BMP5P22003 454 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 HOXA9P31269 272 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CXCR5P32302 372 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ARL1P40616 181 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CRATP43155 626 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 GSTM5P46439 218 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC9A3P48764 834 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CASP4P49662 377 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NOVA1P51513 510 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CDH15P55291 814 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM3BP58499 235 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ROR2Q01974 943 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 GLO1Q04760 184 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SMN1Q16637 294 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CYP1B1Q16678 543 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NDUFA5Q16718 116 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 KLHL38Q2WGJ6 581 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 P3H1Q32P28 736 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF484Q5JVG2 852 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SPANXN2Q5MJ10 180 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 PHYHD1Q5SRE7 291 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 WLSQ5T9L3 541 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 STPG1Q5TH74 334 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SIGIRRQ6IA17 410 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NAPEPLDQ6IQ20 393 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 HMBOX1Q6NT76 420 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 C1orf94Q6P1W5 598 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TTC27Q6P3X3 843 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 UTS2BQ765I0 119 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TRILQ7L0X0 811 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 BZW1Q7L1Q6 419 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 PHLDB2Q86SQ0 1253 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 RTN4RL2Q86UN3 420 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SERINC5Q86VE9 423 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 IQCHQ86VS3 1027 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF677Q86XU0 584 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NRROSQ86YC3 692 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 PLCZ1Q86YW0 608 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TICAM1Q8IUC6 712 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC50Q8IVM0 306 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 MISPQ8IVT2 679 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 ARID3BQ8IVW6 561 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NECAB1Q8N987 351 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 RASGEF1AQ8N9B8 481 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SNX31Q8N9S9 440 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TC2NQ8N9U0 490 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 FSIP1Q8NA03 581 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM98AQ8NCA5 519 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 C17orf47Q8NEP4 570 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NDNFQ8TB73 568 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 LRRC20Q8TCA0 184 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TAS1R2Q8TE23 839 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 RNFT2Q96EX2 444 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 PGAM5Q96HS1 289 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 METTL2AQ96IZ6 378 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 LINC00615Q96LM1 132 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 LURAP1Q96LR2 239 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CNPY3Q9BT09 278 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NUP58Q9BVL2 599 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 CHID1Q9BWS9 393 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 MFFQ9GZY8 342 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 OR52A5Q9H2C5 316 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TRIM45Q9H8W5 580 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 RAVER2Q9HCJ3 691 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 MAN2C1Q9NTJ4 1040 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 EURLQ9NYK6 297 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 TRIM10Q9UDY6 481 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 KCNN3Q9UGI6 736 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NFU1Q9UMS0 254 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NENFQ9UMX5 172 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 PADI2Q9Y2J8 665 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 NEUROG3Q9Y4Z2 214 aa4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 COL5A1P20908 1838 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-204ENST00000368292 MYH15Q9Y2K3 1946 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 UBE4BO95155 1302 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 A0A0A6YYC8 382 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ARGFXA6NJG6 315 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 ASB14A6NK59 587 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CDRT15L2A8MXV6 281 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 A8MZ25 164 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CENPBD1B2RD01 187 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC188H7C350 402 aa4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 I3L1I5 382 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 PGRMC1O00264 195 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-204ENST00000368292 BIRC5O15392 142 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms