RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 MEDAGQ5VYS4 303 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 UBE2Q1Q7Z7E8 422 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 TRIM74Q86UV6 250 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 TAMM41Q96BW9 452 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 FZD3Q9NPG1 666 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 ZNF358Q9NW07 568 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 GHRLQ9UBU3 117 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 BORCS7-ASMTA0A0B4J1R7 106 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 NPC1O15118 1278 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 BRINP1O60477 761 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 SOX14O95416 240 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 IFNA5P01569 189 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 FXYD6P3P58550 94 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 EFR3AQ14156 821 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 CYP1B1Q16678 543 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 C3P1Q6ZMU1 363 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 RABEPKQ7Z6M1 372 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 OSTM1Q86WC4 334 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 ZSWIM9Q86XI8 627 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 HORMAD2Q8N7B1 307 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 CASTOR1Q8WTX7 329 aa15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 URM1Q9BTM9 101 aaKnown RBP15.12■□□□□ 0.01
NUCKS1-201ENST00000367142 FAM159BA6NKW6 160 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 SLC19A2O60779 497 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 ATG12O94817 140 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 GKN3PP0CG01 181 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 SLC26A5P58743 744 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 CSNK1A1LQ8N752 337 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 POGLUT1Q8NBL1 392 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 PSD4Q8NDX1 1056 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 EBF4Q9BQW3 602 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 HCN4Q9Y3Q4 1203 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 A0A0G2JMP0 313 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 ZNF821O75541 412 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 MT-ND2P03891 347 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 GATMP50440 423 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 IST1P53990 364 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 TRAPPC6BQ86SZ2 158 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 CLDN19Q8N6F1 224 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 OR4M2Q8NGB6 313 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 OR8S1Q8NH09 359 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 AP1S3Q96PC3 154 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 DCSTAMPQ9H295 470 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 MYNNQ9NPC7 610 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 GGT3PA6NGU5 568 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 EMC8O43402 210 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 BCAS2O75934 225 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 ETV3P41162 512 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 PSMA6P60900 246 aaKnown RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 MEF2AQ02078 507 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 GAS6Q14393 721 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 OTOL1A6NHN0 477 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 PAK4O96013 591 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 NPPAP01160 153 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 HNRNPKP61978 463 aaKnown RBP eCLIP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 SLC35F1Q5T1Q4 408 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 TUBA3EQ6PEY2 450 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 CILP2Q8IUL8 1156 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 ERI1Q8IV48 349 aaKnown RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 ZNF440Q8IYI8 595 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 NUP43Q8NFH3 380 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 TOR1AIP2Q8NFQ8 470 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 FCAMRQ8WWV6 532 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 HOXB13Q92826 284 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 TIMM8BQ9Y5J9 83 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 A0A1W2PQU0 124 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 DPPA5A6NC42 116 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 LRRN3E7EW58 273 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 COCHO43405 550 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 IL3P08700 152 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 UQCRC1P31930 480 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 C6orf120Q7Z4R8 191 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 LRRN3Q9H3W5 708 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 TOR3AQ9H497 397 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 PCP4L1A6NKN8 68 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 VSTM2BA6NLU5 285 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 HEPACAM2A8MVW5 462 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 ZNF516Q92618 1163 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 RETREG1Q9H6L5 497 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 OAZ3Q9UMX2 235 aa15.11■□□□□ 0.01
NUCKS1-201ENST00000367142 COL3A1P02461 1466 aaPredicted RBP15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 C1orf226A1L170 272 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 MPPED1O15442 326 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 CHRM1P11229 460 aaPredicted RBP15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 IL1R2P27930 398 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 NUDT6P53370 316 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 C1orf61Q13536 156 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 ANKRD26P1Q6NSI1 321 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 CCDC116Q8IYX3 515 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 LRRC25Q8N386 305 aaPredicted RBP15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 TLCD1Q96CP7 247 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 DDIT4LQ96D03 193 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 FBRSQ9HAH7 460 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 SEC14L4Q9UDX3 406 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 HEMK1Q9Y5R4 338 aaPredicted RBP15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 AHSGP02765 367 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 LPLP06858 475 aa15.1■□□□□ 0.01
NUCKS1-201ENST00000367142 ACTC1P68032 377 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms