RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 SLC16A8O95907 504 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 EOMESO95936 686 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 RECKO95980 971 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TGFB1P01137 390 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 SCG5P05408 212 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 CCNYL3P0C7X3 344 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 CBSLP0DN79 551 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 PSMA1P25786 263 aaKnown RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 PBLDP30039 288 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 CBSP35520 551 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 HTR2BP41595 481 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 LIM2P55344 173 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 RAB25P57735 213 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 ARPC4P59998 168 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 NFE2L1Q14494 772 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 LARS2Q15031 903 aaKnown RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 TEAD4Q15561 434 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 PYDC2Q56P42 97 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TXNDC8Q6A555 127 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 RFPL4BQ6ZWI9 263 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 LAS2Q8IYD9 372 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 C9orf43Q8TAL5 461 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 JPH3Q8WXH2 748 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 FCRL1Q96LA6 429 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 SH2B3Q9UQQ2 575 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TRAPPC4Q9Y296 219 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 CMAHPQ9Y471 501 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 CDH23Q9H251 3354 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 FABP12A6NFH5 140 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 PRMT3O60678 531 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 ADAMTS4O75173 837 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TNNI3P19429 210 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 WEE1P30291 646 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 CD70P32970 193 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 TNFAIP8L2Q6P589 184 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 OLIG3Q7RTU3 272 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 VN1R5Q7Z5H4 357 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 SIX5Q8N196 739 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 C11orf24Q96F05 449 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 RSPO3Q9BXY4 272 aaPredicted RBP12.97□□□□□ -0.33
PRKN-205ENST00000366897 C11orf49Q9H6J7 331 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 ZDHHC6Q9H6R6 413 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 BTNL2Q9UIR0 455 aa12.97□□□□□ -0.33
PRKN-205ENST00000366897 INPPL1O15357 1258 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 DPM1O60762 260 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 GPC1P35052 558 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 HNMTP50135 292 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 SCN1BQ07699 218 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 PUM1Q14671 1186 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRKN-205ENST00000366897 POM121L1PQ3SYA9 428 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 PDZK1Q5T2W1 519 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 LYPLAL1Q5VWZ2 237 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 AGTRAPQ6RW13 159 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 DCAF4L2Q8NA75 395 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 C3orf14Q9HBI5 128 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 CTPS2Q9NRF8 586 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 LSM2Q9Y333 95 aaKnown RBP12.96□□□□□ -0.33
PRKN-205ENST00000366897 ALPK3Q96L96 1907 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 MYOFQ9NZM1 2061 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 SZT2Q5T011 3432 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 USP34Q70CQ2 3546 aa12.96□□□□□ -0.33
PRKN-205ENST00000366897 TBKBP1A7MCY6 615 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 GFYI3L273 518 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 OR10H3O60404 316 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 SEMA7AO75326 666 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 APEX1P27695 318 aaKnown RBP12.96□□□□□ -0.34
PRKN-205ENST00000366897 SDC2P34741 201 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 UBE3AQ05086 875 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 ZNF91Q05481 1191 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 OR2G6Q5TZ20 316 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 RETSATQ6NUM9 610 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 ARMCX6Q7L4S7 300 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 KRT73Q86Y46 540 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 YIPF7Q8N8F6 280 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 FAM46DQ8NEK8 389 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 NLGN4YQ8NFZ3 816 aaPredicted RBP12.96□□□□□ -0.34
PRKN-205ENST00000366897 RAB8BQ92930 207 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 GFM1Q96RP9 751 aaKnown RBP12.96□□□□□ -0.34
PRKN-205ENST00000366897 GDF15Q99988 308 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 C1GALT1Q9NS00 363 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.34
PRKN-205ENST00000366897 ZNF282Q9UDV7 671 aaPredicted RBP12.96□□□□□ -0.34
PRKN-205ENST00000366897 FADS2P1A8MWK0 482 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 YES1P07947 543 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 ATP1B2P14415 290 aaPredicted RBP12.95□□□□□ -0.34
PRKN-205ENST00000366897 SERPINA4P29622 427 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 TIA1P31483 386 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRKN-205ENST00000366897 GNG2P59768 71 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 FLYWCH1Q4VC44 716 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 CEP78Q5JTW2 689 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 DEF8Q6ZN54 512 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 SHFQ7M4L6 423 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 PHC2Q8IXK0 858 aa12.95□□□□□ -0.34
PRKN-205ENST00000366897 GEMIN6Q8WXD5 167 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms