RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CNGA4Q8IV77 575 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CCDC50Q8IVM0 306 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZBTB2Q8N680 514 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR8K1Q8NGG5 319 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR13C4Q8NGS5 318 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR2L2Q8NH16 312 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR8K5Q8NH50 307 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 OR1L3Q8NH93 324 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 MBD3L2Q8NHZ7 208 aaPredicted RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 DTX3LQ8TDB6 740 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SCARB1Q8WTV0 552 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 LCN9Q8WX39 176 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 P3H4Q92791 437 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CTHRC1Q96CG8 243 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 C19orf60Q96EN9 201 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 DCUN1D1Q96GG9 259 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 LRFN5Q96NI6 719 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 FCRL5Q96RD9 977 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 HGH1Q9BTY7 390 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 NLNQ9BYT8 704 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SRMSQ9H3Y6 488 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 FAM96AQ9H5X1 160 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 XKR8Q9H6D3 395 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ASB8Q9H765 288 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ACTR5Q9H9F9 607 aaPredicted RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 FANCEQ9HB96 536 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ZNHIT6Q9NWK9 470 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SMOXQ9NWM0 555 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 GAR1Q9NY12 217 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 GPR83Q9NYM4 423 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 MGAT4CQ9UBM8 478 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CRLS1Q9UJA2 301 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 POMT2Q9UKY4 750 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 ACSL5Q9ULC5 683 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 CORO2BQ9UQ03 480 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 COLEC10Q9Y6Z7 277 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SNRNP200O75643 2136 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 NBPF19A0A087WUL8 3843 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 USP9XQ93008 2570 aaPredicted RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SPTBN1Q01082 2364 aaKnown RBP4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 SEC16AO15027 2179 aa4.97□□□□□ -1.61
RNU4-4P-201ENST00000364588 hCG_1818297A0A087WSY0 165 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 MACROD2A1Z1Q3 448 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 C2orf81A6NN90 581 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CLCA1A8K7I4 914 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 C9J4A7 227 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 E7EQ34 232 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 H7C0C1 242 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 DSCR3O14972 297 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZNF749O43361 778 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 HCRTR1O43613 425 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 LDB2O43679 373 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CLDN1O95832 211 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CBSLP0DN79 551 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 RALBP11234 206 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PSMB4P28070 264 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 NDUFS1P28331 727 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PDHA2P29803 388 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PRDX3P30048 256 aaKnown RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CBSP35520 551 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 SLC1A1P43005 524 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ATP5OP48047 213 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 MARCKSL1P49006 195 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PRLHRP49683 370 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 GEMP55040 296 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 XIAPP98170 497 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PRKG2Q13237 762 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 SPARCL1Q14515 664 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 NCF4Q15080 339 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TAF1AQ15573 450 aaPredicted RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TAZQ16635 292 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 BCL7AQ4VC05 210 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TFDP3Q5H9I0 405 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 C1orf189Q5VU69 101 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 MLIPQ5VWP3 458 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CDHR3Q6ZTQ4 885 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TRIM73Q86UV7 250 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 AMIGO1Q86WK6 493 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 RAB43Q86YS6 212 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 GLIS1Q8NBF1 620 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ACVR1CQ8NER5 493 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 OR52E1Q8NGJ3 308 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 HM13Q8TCT9 377 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ZFPM2Q8WW38 1151 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 N4BP2L2Q92802 583 aaPredicted RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 PNPLA2Q96AD5 504 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 SNRNP40Q96DI7 357 aaKnown RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 RBM41Q96IZ5 413 aaKnown RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 LINC00615Q96LM1 132 aaPredicted RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CCDC42Q96M95 316 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 QKIQ96PU8 341 aaKnown RBP eCLIP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 TRAPPC9Q96Q05 1148 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 VAT1Q99536 393 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 CCM2Q9BSQ5 444 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 ANP32EQ9BTT0 268 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 HEMGNQ9BXL5 484 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 QTRT1Q9BXR0 403 aaKnown RBP4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 GBA3Q9H227 469 aa4.96□□□□□ -1.62
RNU4-4P-201ENST00000364588 COG4Q9H9E3 785 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms