RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RETREG1Q9H6L5 497 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 TPT1P8Q9HAU6 139 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 FZD3Q9NPG1 666 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 PCDHB11Q9Y5F2 797 aa14.28□□□□□ -0.12
UBAP1-202ENST00000359544 PATJQ8NI35 1801 aa14.27□□□□□ -0.12
UBAP1-202ENST00000359544 A0A1W2PQH9 124 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 ATP6V1G2-DDX39BF2Z307 99 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 CPSF4O95639 269 aaKnown RBP14.27□□□□□ -0.13
UBAP1-202ENST00000359544 C1QCP02747 245 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 TPOP07202 933 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 ACVRL1P37023 503 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 CRYBA2P53672 197 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 CPSF6Q16630 551 aaKnown RBP eCLIP14.27□□□□□ -0.13
UBAP1-202ENST00000359544 ANKS3Q6ZW76 656 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 GLCCI1Q86VQ1 547 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 PHC2Q8IXK0 858 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 PROKR2Q8NFJ6 384 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 MYLIPQ8WY64 445 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 MTERF3Q96E29 417 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 METTL2AQ96IZ6 378 aaKnown RBP14.27□□□□□ -0.13
UBAP1-202ENST00000359544 GUCD1Q96NT3 240 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
UBAP1-202ENST00000359544 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 MRPL9Q9BYD2 267 aaKnown RBP14.27□□□□□ -0.13
UBAP1-202ENST00000359544 PPA2Q9H2U2 334 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 ELOVL6Q9H5J4 265 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 ZNF224Q9NZL3 707 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 FTSJ1Q9UET6 329 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 LRFN2Q9ULH4 789 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 FZD4Q9ULV1 537 aa14.27□□□□□ -0.13
UBAP1-202ENST00000359544 INMT-MINDY4F8WBC2 141 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 RAF1P04049 648 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 SOX9P48436 509 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PGFP49763 221 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 CRISP1P54107 249 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 NDUFAF5Q5TEU4 345 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PTRHD1Q6GMV3 140 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 SLC24A5Q71RS6 500 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 CRIPAKQ8N1N5 446 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 NANOGP1Q8N7R0 232 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 C11orf65Q8NCR3 313 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 OR9Q2Q8NGE9 314 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PIH1D2Q8WWB5 315 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 KCTD7Q96MP8 289 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 NMUR1Q9HB89 426 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 GALNT9Q9HCQ5 603 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 THSD1Q9NS62 852 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 COQ3Q9NZJ6 369 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 SLC6A14Q9UN76 642 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 FNDC3AQ9Y2H6 1198 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 LINC01553A4QN01 128 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 H7C0S8 307 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 EFCAB14O75071 495 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 STK16O75716 305 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PRAMEF1O95521 474 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 DGKAP23743 735 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 AQP1P29972 269 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 OR1E1P30953 314 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 CNR2P34972 360 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 MAPKAPK2P49137 400 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 SNRPGP62308 76 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 BTG1P62324 171 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 FAM189BP81408 668 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 AANATQ16613 207 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 LIPKQ5VXJ0 399 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 TYW3Q6IPR3 259 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PRSS42Q7Z5A4 293 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 LRRC17Q8N6Y2 441 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 IGSF8Q969P0 613 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 ZNF578Q96N58 590 aaPredicted RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 NELL2Q99435 816 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 TM9SF2Q99805 663 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 CHST8Q9H2A9 424 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 NT5DC2Q9H857 520 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PDFQ9HBH1 243 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 ZC4H2Q9NQZ6 224 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 TMLHEQ9NVH6 421 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 CLEC2DQ9UHP7 191 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 RPL36Q9Y3U8 105 aaKnown RBP14.26□□□□□ -0.13
UBAP1-202ENST00000359544 PCDHB7Q9Y5E2 793 aa14.26□□□□□ -0.13
UBAP1-202ENST00000359544 NPIPB8E9PQR5 432 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 FABP7O15540 132 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 ENTPD6O75354 484 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 IFNA7P01567 189 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 THP07101 528 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 HLA-EP13747 358 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 COX7A2P14406 83 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 ZNF250P15622 560 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 ENPP1P22413 925 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 LHCGRP22888 699 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 APEX1P27695 318 aaKnown RBP14.25□□□□□ -0.13
UBAP1-202ENST00000359544 KCNC3Q14003 757 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 ELOAQ14241 798 aaKnown RBP14.25□□□□□ -0.13
UBAP1-202ENST00000359544 RAB30Q15771 203 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 CLLU1Q5K131 121 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
UBAP1-202ENST00000359544 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.25□□□□□ -0.13
UBAP1-202ENST00000359544 GTPBP3Q969Y2 492 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms