RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TSPAN15O95858 294 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 JUNDP17535 347 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 GABRA3P34903 492 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ARHGAP19Q14CB8 494 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 EGFLAMQ63HQ2 1017 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 MBLAC2Q68D91 279 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 KIAA1211LQ6NV74 962 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 CPNE9Q8IYJ1 553 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 WDSUB1Q8N9V3 476 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 ANKRD52Q8NB46 1076 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 SORCS1Q8WY21 1168 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 POLR2J2Q9GZM3 115 aaKnown RBP9.42□□□□□ -0.9
CHD3-202ENST00000358181 NAALAD2Q9Y3Q0 740 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 UBIAD1Q9Y5Z9 338 aa9.42□□□□□ -0.9
CHD3-202ENST00000358181 K7EPK0 472 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CNTN5O94779 1100 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 AK4P27144 223 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 CCNFP41002 786 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 NKPD1Q17RQ9 610 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 FAM71E2Q8N5Q1 922 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 HOXB13Q92826 284 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 HHIPQ96QV1 700 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 WACQ9BTA9 647 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 UNC93B1Q9H1C4 597 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 ZNF282Q9UDV7 671 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 STUB1Q9UNE7 303 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 SNCGO76070 127 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CDK2P24941 298 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 GPR155Q7Z3F1 870 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 PHC2Q8IXK0 858 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 RBM24Q9BX46 236 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 OR51I1Q9H343 314 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TLR9Q9NR96 1032 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 C19orf12Q9NSK7 152 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CLEC4EQ9ULY5 219 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TLL2Q9Y6L7 1015 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 MYO10Q9HD67 2058 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 ALADP13716 330 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 KCNC1P48547 511 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 PXNP49023 591 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 EEFSECP57772 596 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 PON2Q15165 354 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 MYLK3Q32MK0 819 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 ANKDD1AQ495B1 522 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 BAIAP2L2Q6UXY1 529 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CERS6Q6ZMG9 384 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 RBMXL3Q8N7X1 1067 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 CNOT9Q92600 299 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 LRRN3Q9H3W5 708 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 POT1Q9NUX5 634 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 NUDT4Q9NZJ9 180 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 LSM5Q9Y4Y9 91 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 CYP3A7-CYP3A51PA0A087WV96 503 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 FAM170BA6NMN3 283 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 H7C2Y5 167 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TOR1AO14656 332 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 IFNA17P01571 189 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CSNK2A2P19784 350 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 CYP3A7P24462 503 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 GDF1P27539 372 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 HOXA1P49639 335 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 CCL11P51671 97 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 PPP2CAP67775 309 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 PLEKHO2Q8TD55 490 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TAAR8Q969N4 342 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 UHRF1Q96T88 793 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 SAP130Q9H0E3 1048 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 WDR45Q9Y484 360 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CDC14CA4D256 554 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 AQP7O14520 342 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TERTO14746 1132 aaKnown RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 UGT1A9O60656 530 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 UGT1A6P19224 532 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 NDUFV2P19404 249 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 NDUFS1P28331 727 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 FOLR3P41439 243 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 ELF3P78545 371 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 LRIT3Q3SXY7 679 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 SFRP5Q5T4F7 317 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 SLC36A4Q6YBV0 504 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 MBOAT1Q6ZNC8 495 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 MON1BQ7L1V2 547 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 GPR149Q86SP6 731 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 HORMAD2Q8N7B1 307 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 AGAP11Q8TF27 550 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TMCO6Q96DC7 493 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 ZFYVE21Q9BQ24 234 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 TMEM134Q9H6X4 195 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 UGT1A7Q9HAW7 530 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 UGT1A10Q9HAW8 530 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 UGT1A8Q9HAW9 530 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 MYH10P35580 1976 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 CREBL2O60519 120 aaPredicted RBP9.41□□□□□ -0.9
CHD3-202ENST00000358181 MT-CO2P00403 227 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 OXTRP30559 389 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 LBX1P52954 281 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 SEC23BQ15437 767 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 AWAT2Q6E213 333 aa9.41□□□□□ -0.9
CHD3-202ENST00000358181 NIPA1Q7RTP0 329 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms