RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 SLC6A15Q9H2J7 730 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR51I1Q9H343 314 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TRPV4Q9HBA0 871 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 KCNK6Q9Y257 313 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 LRRN3E7EW58 273 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 LEFTY1O75610 366 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 STC2O76061 302 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PDYNP01213 254 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 KLK3P07288 261 aaPredicted RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 GGT5P36269 586 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PREPP48147 710 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 SCRN3Q0VDG4 424 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ST3GAL4Q11206 333 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF598Q86UK7 904 aaKnown RBP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PRSS58Q8IYP2 241 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF675Q8TD23 568 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 GPR62Q9BZJ7 368 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 LRRN3Q9H3W5 708 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 CENPMQ9NSP4 180 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TMLHEQ9NVH6 421 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TAS2R10Q9NYW0 307 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 GRHPRQ9UBQ7 328 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 LTBP4Q8N2S1 1624 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TEX13CA0A0J9YWL9 993 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 DHRS4L1P0CG22 281 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 BMP2P12643 396 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PCBP2Q15366 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PPP1R3AQ16821 1122 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 PYHIN1Q6K0P9 492 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 HSDL2Q6YN16 418 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR10T2Q8NGX3 314 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 THAP6Q8TBB0 222 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 SHKBP1Q8TBC3 707 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 FUZQ9BT04 418 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 B3GNT4Q9C0J1 378 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM184CQ9NVA4 438 aa11.29□□□□□ -0.6
COL9A1-202ENST00000357250 OR6C70A6NIJ9 312 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 DISC1C4P0D8 188 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 M0QZQ0 153 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PCDHGA12O60330 932 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PRH1P02810 166 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ANKDD1AQ495B1 522 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ARHGAP40Q5TG30 622 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 DPY19L3Q6ZPD9 716 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GRASPQ7Z6J2 395 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ASPGQ86U10 573 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 KCT2Q8NC54 265 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 NKD1Q969G9 470 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ZNF304Q9HCX3 659 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PRKAB1Q9Y478 270 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PCDHB14Q9Y5E9 798 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GNB5O14775 395 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 XPNPEP2O43895 674 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 CSTBP04080 98 aaKnown RBP11.28□□□□□ -0.6
COL9A1-202ENST00000357250 CD9P21926 228 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PRKACGP22612 351 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GPR143P51810 404 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PHC1P78364 1004 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 MC1RQ01726 317 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 SLC3A1Q07837 685 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GRB7Q14451 532 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 WDR45BQ5MNZ6 344 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ULK3Q6PHR2 472 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ASRGL1Q7L266 308 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 METTL25Q8N6Q8 603 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PHOSPHO1Q8TCT1 267 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 TMEM203Q969S6 136 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 JSRP1Q96MG2 331 aaPredicted RBP11.28□□□□□ -0.6
COL9A1-202ENST00000357250 RAD9AQ99638 391 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 TMED9Q9BVK6 235 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 SMG9Q9H0W8 520 aaKnown RBP11.28□□□□□ -0.6
COL9A1-202ENST00000357250 MARCH7Q9H992 704 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 KLHL42Q9P2K6 505 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 MAU2Q9Y6X3 613 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GJA8P48165 433 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 RPA4Q13156 261 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ZMYND11Q15326 602 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GLT8D1Q68CQ7 371 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ASB18Q6ZVZ8 466 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PNPLA1Q8N8W4 532 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 OR4K1Q8NGD4 311 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 KCNN1Q92952 543 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 KLHDC7BQ96G42 594 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 TM9SF2Q99805 663 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ACTR6Q9GZN1 396 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 HCN2Q9UL51 889 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 PLEKHA6Q9Y2H5 1048 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 CEP290O15078 2479 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 A0A1B0GVI7 797 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 GMFGO60234 142 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 DIRAS1O95057 198 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 ADAP00813 363 aa11.28□□□□□ -0.6
COL9A1-202ENST00000357250 CRISP1P54107 249 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms