RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 HCN1O60741 890 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 ZNF888P0CJ79 500 aaPredicted RBP14.65□□□□□ -0.06
DDX55-202ENST00000354291 IMPA1P29218 277 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 RGS4P49798 205 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 AGFG1P52594 562 aaKnown RBP14.65□□□□□ -0.06
DDX55-202ENST00000354291 SKP1P63208 163 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 CRYMQ14894 314 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 SPANXN3Q5MJ09 141 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 MAATS1Q7Z4T9 603 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 C17orf64Q86WR6 236 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 CPNE9Q8IYJ1 553 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 LRRC75A-AS1Q8N1F1 130 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 FAM129AQ9BZQ8 928 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 PCBD2Q9H0N5 130 aa14.65□□□□□ -0.06
DDX55-202ENST00000354291 DDX47Q9H0S4 455 aaKnown RBP14.65□□□□□ -0.06
DDX55-202ENST00000354291 TUBA8Q9NY65 449 aaPredicted RBP14.65□□□□□ -0.06
DDX55-202ENST00000354291 ZNF629Q9UEG4 869 aaPredicted RBP14.65□□□□□ -0.06
DDX55-202ENST00000354291 IGKV3D-11A0A0A0MRZ8 115 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 OR1F1O43749 312 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 C8GP07360 202 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 CDH1P12830 882 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 BMP7P18075 431 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 ENDOUP21128 410 aaKnown RBP14.64□□□□□ -0.07
DDX55-202ENST00000354291 HNF4AP41235 474 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 TBPL1P62380 186 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 DHX9Q08211 1270 aaKnown RBP14.64□□□□□ -0.07
DDX55-202ENST00000354291 PRSS57Q6UWY2 283 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 RTL4Q6ZR62 310 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 PIWIL4Q7Z3Z4 852 aaKnown RBP14.64□□□□□ -0.07
DDX55-202ENST00000354291 EEF1AKMT1Q8WVE0 214 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 PIGTQ969N2 578 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 PERPQ96FX8 193 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 PDLIM2Q96JY6 352 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 SCYL1Q96KG9 808 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 RASL10BQ96S79 203 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 PARVBQ9HBI1 364 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 SEMA4BQ9NPR2 832 aaPredicted RBP14.64□□□□□ -0.07
DDX55-202ENST00000354291 MYOTQ9UBF9 498 aa14.64□□□□□ -0.07
DDX55-202ENST00000354291 KDM4EB2RXH2 506 aaPredicted RBP14.63□□□□□ -0.07
DDX55-202ENST00000354291 EEF1E1-BLOC1S5C9J1V9 151 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 EEF1E1O43324 174 aaKnown RBP14.63□□□□□ -0.07
DDX55-202ENST00000354291 GOSR1O95249 250 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 IL2RAP01589 272 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 AHSGP02765 367 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 P04436 131 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 RNH1P13489 461 aaKnown RBP14.63□□□□□ -0.07
DDX55-202ENST00000354291 PPP2R1BP30154 601 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 CEACAM8P31997 349 aaPredicted RBP14.63□□□□□ -0.07
DDX55-202ENST00000354291 RAB8AP61006 207 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 FOXO1Q12778 655 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 SP140Q13342 867 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 POMZP3Q6PJE2 187 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 SYDE1Q6ZW31 735 aaPredicted RBP14.63□□□□□ -0.07
DDX55-202ENST00000354291 GALNT7Q86SF2 657 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 CNTN4Q8IWV2 1026 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 PDIK1LQ8N165 341 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 MYO1HQ8N1T3 1032 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 FBXW8Q8N3Y1 598 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 RUNDC3BQ96NL0 473 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 SACM1LQ9NTJ5 587 aa14.63□□□□□ -0.07
DDX55-202ENST00000354291 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.63□□□□□ -0.07
DDX55-202ENST00000354291 CASKO14936 926 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 EPPINO95925 133 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 HIST1H2AGP0C0S8 130 aaPredicted RBP14.62□□□□□ -0.07
DDX55-202ENST00000354291 HIST1H2ADP20671 130 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 CCND1P24385 295 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 IVDP26440 423 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 GABRB3P28472 473 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 TRPC1P48995 793 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 GPR143P51810 404 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 ZNF136P52737 540 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 TIAL1Q01085 375 aaKnown RBP eCLIP14.62□□□□□ -0.07
DDX55-202ENST00000354291 BMPR2Q13873 1038 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 MORF4L2Q15014 288 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 HYAL4Q2M3T9 481 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 MSS51Q4VC12 460 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 NIPAL1Q6NVV3 410 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 PAQR3Q6TCH7 311 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 ABHD13Q7L211 337 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 CERS2Q96G23 380 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 HIST1H2AHQ96KK5 128 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 NDNQ99608 321 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 PIP5K1AQ99755 562 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 HIST1H2AJQ99878 128 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 H2AFJQ9BTM1 129 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 PPANQ9NQ55 473 aaKnown RBP14.62□□□□□ -0.07
DDX55-202ENST00000354291 PDE10AQ9Y233 779 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 EIF3LQ9Y262 564 aaKnown RBP14.62□□□□□ -0.07
DDX55-202ENST00000354291 EML6Q6ZMW3 1958 aa14.62□□□□□ -0.07
DDX55-202ENST00000354291 PABPN1LA6NDY0 278 aaKnown RBP14.61□□□□□ -0.07
DDX55-202ENST00000354291 AHRRA9YTQ3 701 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 BANF1O75531 89 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 CCL3P10147 92 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 PIGAP37287 484 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 IL2P60568 153 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 SORDQ00796 357 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 RGS1Q08116 209 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 NAE1Q13564 534 aa14.61□□□□□ -0.07
DDX55-202ENST00000354291 PWP1Q13610 501 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms