RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ADCK2Q7Z695 626 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TMEM179BQ7Z7N9 219 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 PATL1Q86TB9 770 aaKnown RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 STK32CQ86UX6 486 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 RNF130Q86XS8 419 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 HIPK1Q86Z02 1210 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 ZDHHC21Q8IVQ6 265 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 SLC30A8Q8IWU4 369 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 ACOT4Q8N9L9 421 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 SRFBP1Q8NEF9 429 aaKnown RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 FLCNQ8NFG4 579 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TSTD1Q8NFU3 115 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 OR2T29Q8NH02 315 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 MAGEE2Q8TD90 523 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 JPH3Q8WXH2 748 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 UCN3Q969E3 161 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TM4SF19Q96DZ7 209 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 NRBF2Q96F24 287 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 ZBED6CLQ96FA7 236 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 SMIM10Q96HG1 83 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 HSH2DQ96JZ2 352 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TRAPPC9Q96Q05 1148 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 PHOX2BQ99453 314 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 DOHHQ9BU89 302 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 FAIM2Q9BWQ8 316 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 GSDMCQ9BYG8 508 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 MRPS26Q9BYN8 205 aaKnown RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 PCED1AQ9H1Q7 454 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TCEAL2Q9H3H9 227 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 SRMSQ9H3Y6 488 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TM9SF3Q9HD45 589 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 NEUROD4Q9HD90 331 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 PRM3Q9NNZ6 103 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 VNN3Q9NY84 501 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 APOBEC3BQ9UH17 382 aaKnown RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 PILRAQ9UKJ1 303 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 ACSL6Q9UKU0 697 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 CES1P1Q9UKY3 287 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 FAF1Q9UNN5 650 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 ENTPD2Q9Y5L3 495 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 MAGED1Q9Y5V3 778 aaPredicted RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 DOCK9Q9BZ29 2069 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 GCN1Q92616 2671 aaKnown RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 USP24Q9UPU5 2620 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 XIRP2A4UGR9 3374 aa6.57□□□□□ -1.36
TRIM55-203ENST00000350034 TPRP12270 2363 aaKnown RBP6.57□□□□□ -1.36
TRIM55-203ENST00000350034 NCOR2Q9Y618 2525 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 A0A1B0GTW7 788 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 A0A1W2PR77 199 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 METTL12A8MUP2 240 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MYO1GB0I1T2 1018 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 E9PQ18 207 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 VILLO15195 856 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MAP3K13O43283 966 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ERI3O43414 337 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SUV39H1O43463 412 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GUCY1B2O75343 617 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SNAP29O95721 258 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF682O95780 498 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 FABP3P05413 133 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GNAO1P09471 354 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 THEGLP0DJG4 465 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 FPR1P21462 350 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CHI3L1P36222 383 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CRATP43155 626 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SSR2P43308 183 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 RPL5P46777 297 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CDK9P50750 372 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 PLA2G16P53816 162 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ITGA1P56199 1179 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 DSTNP60981 165 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 STXBP1P61764 594 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SELENOWP63302 87 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 TUBA4AP68366 448 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 VLDLRP98155 873 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CDK6Q00534 326 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 EPS8Q12929 822 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SLAMF1Q13291 335 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SCARB2Q14108 478 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SPIDRQ14159 915 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GPR18Q14330 331 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 CEBPEQ15744 281 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 MAPK11Q15759 364 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 RFX4Q33E94 735 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 LIN52Q52LA3 116 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 OTUD3Q5T2D3 398 aaPredicted RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 NDUFAF5Q5TEU4 345 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 RNF220Q5VTB9 566 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 FCRL6Q6DN72 434 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 TMEM64Q6YI46 380 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 VTCN1Q7Z7D3 282 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 GALNT10Q86SR1 603 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 ASPGQ86U10 573 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 DCP2Q8IU60 420 aaKnown RBP6.56□□□□□ -1.36
TRIM55-203ENST00000350034 HS3ST5Q8IZT8 346 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 FRMD1Q8N878 549 aa6.56□□□□□ -1.36
TRIM55-203ENST00000350034 OR10Q1Q8NGQ4 319 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms