RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 YY2O15391 372 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ZBTB48P10074 688 aaPredicted RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 SPP1P10451 314 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 FCGR2AP12318 317 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 PGAM1P18669 254 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 PTPN6P29350 595 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 HSD17B2P37059 387 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 PSME3P61289 254 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 CDH18Q13634 790 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 CAPRIN1Q14444 709 aaKnown RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 KCTD19Q17RG1 926 aaPredicted RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 GGNBP1Q5YKI7 109 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 NCEH1Q6PIU2 408 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 TRILQ7L0X0 811 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 SLC51AQ86UW1 340 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 TPRA1Q86W33 373 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ZFAND4Q86XD8 727 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 AMER2Q8N7J2 671 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 RTL3Q8N8U3 475 aaKnown RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 SHKBP1Q8TBC3 707 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 TAS1R2Q8TE23 839 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 SLC13A3Q8WWT9 602 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ADAMTS14Q8WXS8 1223 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 NSMCE3Q96MG7 304 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 C1QTNF7Q9BXJ2 289 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 SLITRK2Q9H156 845 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 TASP1Q9H6P5 420 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 SLC7A7Q9UM01 511 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 FAM32AQ9Y421 112 aaKnown RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 CEPT1Q9Y6K0 416 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 BCL9O00512 1426 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 SMIM28A0A1B0GU29 152 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ST8SIA3O43173 380 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 BUD23O43709 281 aaKnown RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 HOXB9P17482 250 aaPredicted RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 GALP22466 123 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 GSSP48637 474 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ARHGDIAP52565 204 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 CARD18P57730 90 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 TAS2R40P59535 323 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 PLCXD3Q63HM9 321 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 HEPHL1Q6MZM0 1159 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ZNF852Q6ZMS4 543 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ZBTB8OSQ8IWT0 167 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 CLEC4FQ8N1N0 589 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 AGBL5Q8NDL9 886 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 OR56A1Q8NGH5 318 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 C12orf43Q96C57 262 aaKnown RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 BDH2Q9BUT1 245 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 MECRQ9BV79 373 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 B3GAT2Q9NPZ5 323 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 RBAKQ9NYW8 714 aaPredicted RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 STMN3Q9NZ72 180 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 CRNNQ9UBG3 495 aaPredicted RBP5.72□□□□□ -1.49
RFC1-201ENST00000349703 RBPJLQ9UBG7 517 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 HESX1Q9UBX0 185 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 SLC45A2Q9UMX9 530 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 ADGRA2Q96PE1 1338 aa5.72□□□□□ -1.49
RFC1-201ENST00000349703 PRR33A8MZF0 331 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 HDAC3O15379 428 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 GRID2O43424 1007 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 PROZP22891 400 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 RPL9P32969 192 aaKnown RBP5.71□□□□□ -1.49
RFC1-201ENST00000349703 BSGP35613 385 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 GSK3AP49840 483 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 WDR5P61964 334 aaKnown RBP5.71□□□□□ -1.49
RFC1-201ENST00000349703 VMACQ2NL98 169 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 DCST1Q5T197 706 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 PXDC1Q5TGL8 231 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 HHIPL2Q6UWX4 724 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 ABHD15Q6UXT9 468 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 GRPEL2Q8TAA5 225 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 WFDC12Q8WWY7 111 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 POLR2J2Q9GZM3 115 aaKnown RBP5.71□□□□□ -1.49
RFC1-201ENST00000349703 POLR2J3Q9H1A7 115 aaKnown RBP5.71□□□□□ -1.49
RFC1-201ENST00000349703 FZD3Q9NPG1 666 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 FKBP14Q9NWM8 211 aa5.71□□□□□ -1.49
RFC1-201ENST00000349703 AGO2Q9UKV8 859 aaKnown RBP5.71□□□□□ -1.49
RFC1-201ENST00000349703 A0A0A0MRY4 1105 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 OOEPA6NGQ2 149 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 OTOL1A6NHN0 477 aaPredicted RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 NEDD8-MDP1E9PL57 170 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 H3BNH8 94 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 VCYO14598 125 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 BANF1O75531 89 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SYNGR4O95473 234 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 OXSR1O95747 527 aaPredicted RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 RPLP0P05388 317 aaKnown RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 TKTP29401 623 aaKnown RBP5.71□□□□□ -1.5
RFC1-201ENST00000349703 SDC4P31431 198 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 ID2Q02363 134 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 HSPA14Q0VDF9 509 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PRAMEF20Q5VT98 475 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 PLA2G4FQ68DD2 849 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 SERPINA12Q8IW75 414 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 CMTM4Q8IZR5 234 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 LILRA2Q8N149 483 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 CDC26Q8NHZ8 85 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 LPPQ93052 612 aa5.71□□□□□ -1.5
RFC1-201ENST00000349703 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms