RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 FBXW2Q9UKT8 454 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 MRPS33Q9Y291 106 aaKnown RBP14.9□□□□□ -0.02
SRPK1-201ENST00000346162 WNT6Q9Y6F9 365 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 COLEC10Q9Y6Z7 277 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 MYH9P35579 1960 aaKnown RBP14.9□□□□□ -0.02
SRPK1-201ENST00000346162 MYO5AQ9Y4I1 1855 aaKnown RBP14.9□□□□□ -0.02
SRPK1-201ENST00000346162 UPK3BL1B0FP48 263 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 UPK3BL2E5RIL1 263 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 SOCS5O75159 536 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 STC2O76061 302 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 RAB2AP61019 212 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 ABHD18Q0P651 414 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 GPR19Q15760 415 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 TAZQ16635 292 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 MORN1Q5T089 497 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 PSAPL1Q6NUJ1 521 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 C17orf99Q6UX52 265 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 VITQ6UXI7 678 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 Q6ZVL8 140 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 ZBED6CLQ96FA7 236 aaPredicted RBP14.9□□□□□ -0.02
SRPK1-201ENST00000346162 RETREG1Q9H6L5 497 aa14.9□□□□□ -0.02
SRPK1-201ENST00000346162 TRIM3O75382 744 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 HLA-DPB1P04440 258 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 FHP07954 510 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 TYRP14679 529 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 CMPK1P30085 196 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 AGTRAPQ6RW13 159 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 ZSCAN1Q8NBB4 408 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 CHDHQ8NE62 594 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 LCN9Q8WX39 176 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SPACA7Q96KW9 195 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 CCM2Q9BSQ5 444 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF471Q9BX82 626 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 R3HDMLQ9H3Y0 253 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 IFT46Q9NQC8 304 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 FZD4Q9ULV1 537 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 MGAT4BQ9UQ53 548 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 INSL6Q9Y581 213 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 A0A1W2PQL4 384 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 FAM86C2PA6NEL3 165 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 C1orf196B1AJZ1 125 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 PRKCAP17252 672 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SLC25A25Q6KCM7 469 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 DHRS4L2Q6PKH6 230 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 THOC6Q86W42 341 aaKnown RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 LACC1Q8IV20 430 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 FAM217AQ8IXS0 508 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 LRCH3Q96II8 777 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 TMED9Q9BVK6 235 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 OR51E2Q9H255 320 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 PTGDR2Q9Y5Y4 395 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 TLR4O00206 839 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SCAMP1O15126 338 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 GRID2O43424 1007 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 CDC40O60508 579 aaKnown RBP eCLIP14.89□□□□□ -0.039e-6■■■□□ 15.9
SRPK1-201ENST00000346162 MITFO75030 526 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 LAMP2P13473 410 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 HTR2AP28223 471 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SSTR2P30874 369 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 NTRK2Q16620 822 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 ZNF783Q6ZMS7 281 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 TTC9BQ8N6N2 239 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 KDM1BQ8NB78 822 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 RIPOR3Q96MK2 946 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 C11orf84Q9BUA3 381 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 BRINP2Q9C0B6 783 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SMG9Q9H0W8 520 aaKnown RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 PEX14O75381 377 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SEC14L2O76054 403 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 MAT2AP31153 395 aaKnown RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 RYKP34925 604 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 RPS5P46782 204 aaKnown RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 ERVK-21P61565 698 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 FLYWCH1Q4VC44 716 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 COQ5Q5HYK3 327 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 FAM205BPQ63HN1 556 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 ISCA2Q86U28 154 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 PNPLA1Q8N8W4 532 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 KLK6Q92876 244 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 UPB1Q9UBR1 384 aa14.89□□□□□ -0.03
SRPK1-201ENST00000346162 SIPA1L3O60292 1781 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-201ENST00000346162 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 HOXC11O43248 304 aaPredicted RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 APOC1P02654 83 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 HIST1H2ABP04908 130 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 FDXRP22570 491 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 GANABQ14697 944 aaKnown RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 LY6G5CQ5SRR4 150 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 CREB3L2Q70SY1 520 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 HIST3H2AQ7L7L0 130 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 HIST1H2ACQ93077 130 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 DNAJC15Q9Y5T4 150 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 MAGED1Q9Y5V3 778 aaPredicted RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 A0A0G2JN53 185 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 LEFTY2O00292 366 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 NME6O75414 186 aaPredicted RBP14.88□□□□□ -0.03
SRPK1-201ENST00000346162 TNFSF8P32971 234 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 PRR5P85299 388 aa14.88□□□□□ -0.03
SRPK1-201ENST00000346162 NPRL3Q12980 569 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms