RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 LCMT2O60294 686 aaKnown RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 FGL2Q14314 439 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 C2orf27AQ580R0 203 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 C16orf87Q6PH81 154 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 CEACAM20Q6UY09 585 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 UBE3DQ7Z6J8 389 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 DSG4Q86SJ6 1040 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SLC38A5Q8WUX1 472 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 IPCEF1Q8WWN9 437 aaPredicted RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 GEMIN6Q8WXD5 167 aaKnown RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 RAB7BQ96AH8 199 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PDXPQ96GD0 296 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 AIF1LQ9BQI0 150 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 CCNB1IP1Q9NPC3 277 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 FAIMQ9NVQ4 179 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 A0A0G2JN53 185 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 FAM227AF5H4B4 570 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 FFAR1O14842 300 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SEMA7AO75326 666 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SEMA3DO95025 777 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PCDH8O95206 1070 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 ANXA8P13928 327 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 GABRB1P18505 474 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 IDH2P48735 452 aaKnown RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 ST13P50502 369 aaKnown RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 HMGA2P52926 109 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 NUDT6P53370 316 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 LIM2P55344 173 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 GPM6BQ13491 265 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 ARHGAP19Q14CB8 494 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PDGFRLQ15198 375 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 MAPK11Q15759 364 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 MLF2Q15773 248 aaPredicted RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SAXO2Q658L1 398 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SLCO6A1Q86UG4 719 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 IGFN1Q86VF2 1251 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 ARMC8Q8IUR7 673 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 NLGN4XQ8N0W4 816 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SVOPQ8N4V2 548 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 APOBEC4Q8WW27 367 aaKnown RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PIP5K1AQ99755 562 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 COPS4Q9BT78 406 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 BTBD2Q9BX70 525 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 NLNQ9BYT8 704 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PLA2G2FQ9BZM2 168 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 AICDAQ9GZX7 198 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PELI2Q9HAT8 420 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 SIRT3Q9NTG7 399 aaPredicted RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 TEX10Q9NXF1 929 aaPredicted RBP14.7□□□□□ -0.06
UPF3B-202ENST00000345865 AHSPQ9NZD4 102 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 PSORS1C1Q9UIG5 152 aa14.7□□□□□ -0.06
UPF3B-202ENST00000345865 DOCK8Q8NF50 2099 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 IGKV1-8A0A0C4DH67 115 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 WASHC1A8K0Z3 465 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 SNRNP200O75643 2136 aaKnown RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 KAT7O95251 611 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 LIPAP38571 399 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 CCR8P51685 355 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 MANFP55145 182 aaKnown RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 REEP5Q00765 189 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 NR1D2Q14995 579 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 WASH2PQ6VEQ5 465 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 P3H2Q8IVL5 708 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 FAM20CQ8IXL6 584 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 DNAJC22Q8N4W6 341 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 GGHQ92820 318 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 KLK6Q92876 244 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 RAB8BQ92930 207 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 GTPBP3Q969Y2 492 aaKnown RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 NEURL3Q96EH8 262 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 NECTIN3Q9NQS3 549 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 PNMA8BQ9ULN7 279 aaPredicted RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 ANGPT4Q9Y264 503 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 POFUT2Q9Y2G5 429 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 ENPP4Q9Y6X5 453 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 SLC22A1O15245 554 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 CAPN5O15484 640 aaPredicted RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 MRPS14O60783 128 aaKnown RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 PAK4O96013 591 aaPredicted RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 BCHEP06276 602 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 PSMD7P51665 324 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 PCBP4P57723 403 aaKnown RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 HSPB3Q12988 150 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 RUNX3Q13761 415 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 UBE2UQ5VVX9 321 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 TMEM236Q5W0B7 351 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 REEP3Q6NUK4 255 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 DCDC5Q6ZRR9 648 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 SLC44A2Q8IWA5 706 aaPredicted RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 GPR32P1Q8NGA4 272 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 DYNC2LI1Q8TCX1 351 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 SNRNP27Q8WVK2 155 aaKnown RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 INSM2Q96T92 566 aaPredicted RBP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 BCL7BQ9BQE9 202 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 WFDC6Q9BQY6 131 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 TEX101Q9BY14 249 aa14.69□□□□□ -0.06
UPF3B-202ENST00000345865 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.69□□□□□ -0.06
UPF3B-202ENST00000345865 M0R082 166 aa14.68□□□□□ -0.06
UPF3B-202ENST00000345865 OR1F1O43749 312 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms