RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 NCLNQ969V3 563 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 FAM162AQ96A26 154 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 CHID1Q9BWS9 393 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 GORASP2Q9H8Y8 452 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SLC6A20Q9NP91 592 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 MYNNQ9NPC7 610 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 ZNF624Q9P2J8 865 aaPredicted RBP8.8□□□□□ -1
ATG4A-202ENST00000345734 ATP6V1HQ9UI12 483 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 BTNL2Q9UIR0 455 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 KLHL20Q9Y2M5 609 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 AP3M1Q9Y2T2 418 aa8.8□□□□□ -1
ATG4A-202ENST00000345734 SCN3AQ9NY46 2000 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 TM4SF5O14894 197 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 DEAF1O75398 565 aaPredicted RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 CREG1O75629 220 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 EPN2O95208 641 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 SERPIND1P05546 499 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 ABCB1P08183 1280 aaPredicted RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 ABHD18Q0P651 414 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 GAB1Q13480 694 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 MED21Q13503 144 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 GK3PQ14409 553 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 C16orf72Q14CZ0 275 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 MPEG1Q2M385 716 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 FAM180BQ6P0A1 224 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 ABRAXAS1Q6UWZ7 409 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 ZNF852Q6ZMS4 543 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 ZBTB49Q6ZSB9 765 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 GPR155Q7Z3F1 870 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 NRROSQ86YC3 692 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 ADGRF3Q8IZF5 1079 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 TNIP2Q8NFZ5 429 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 OR4E2Q8NGC2 313 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 OR4A15Q8NGL6 344 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 MSANTD3Q96H12 275 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 CENPNQ96H22 339 aaPredicted RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 REXO5Q96IC2 774 aaKnown RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 NR1H4Q96RI1 486 aaPredicted RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 PRPF18Q99633 342 aaKnown RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 MACROD1Q9BQ69 325 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 DPH2Q9BQC3 489 aaPredicted RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 GPR174Q9BXC1 333 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 RAB11FIP5Q9BXF6 653 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 AICDAQ9GZX7 198 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 TCEAL2Q9H3H9 227 aaPredicted RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 KIR3DX1Q9H7L2 352 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 NT5DC2Q9H857 520 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 LMAN1LQ9HAT1 526 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 MRPS30Q9NP92 439 aaKnown RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 LHX9Q9NQ69 397 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 PDP2Q9P2J9 529 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 SPASTQ9UBP0 616 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 SCOCQ9UIL1 159 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 UTS2RQ9UKP6 389 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 CNOT11Q9UKZ1 510 aaKnown RBP8.79□□□□□ -1
ATG4A-202ENST00000345734 PCDHGB4Q9UN71 923 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 PCDHGB5Q9Y5G0 923 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 N6AMT1Q9Y5N5 214 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 HEBP2Q9Y5Z4 205 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 AP4B1Q9Y6B7 739 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 SLCO1B1Q9Y6L6 691 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 MYO15AQ9UKN7 3530 aa8.79□□□□□ -1
ATG4A-202ENST00000345734 A0A0G2JN53 185 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 C1orf226A1L170 272 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 EVPLLA8MZ36 301 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 MAN2B1O00754 1011 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 PPM1DO15297 605 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SCELO95171 688 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 C6orf47O95873 294 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZCCHC18P0CG32 403 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 BSGP35613 385 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 BCL6P41182 706 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 DGKEP52429 567 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 PDE7AQ13946 482 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 PDK3Q15120 406 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ATP6AP1Q15904 470 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZNF542PQ5EBM4 170 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 CCNYL2Q5T2Q4 361 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ANXA8L1Q5VT79 327 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 KIAA1614Q5VZ46 1190 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 KIAA0895LQ68EN5 471 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 OR52E8Q6IFG1 317 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 ZCCHC8Q6NZY4 707 aaKnown RBP8.78□□□□□ -1
ATG4A-202ENST00000345734 TMEM154Q6P9G4 183 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 LPCAT2Q7L5N7 544 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 UBE3DQ7Z6J8 389 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 CBR4Q8N4T8 237 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 AMER3Q8N944 861 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 OR2L3Q8NG85 312 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 OR10Q1Q8NGQ4 319 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 LCN9Q8WX39 176 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 RLN3Q8WXF3 142 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 PPCDCQ96CD2 204 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 CXorf40BQ96DE9 158 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 SYNPO2LQ9H987 977 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 TPT1P8Q9HAU6 139 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 UBAP1Q9NZ09 502 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 AHSPQ9NZD4 102 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 RAB26Q9ULW5 256 aa8.78□□□□□ -1
ATG4A-202ENST00000345734 MAPRE3Q9UPY8 281 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms