RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 VTI1BQ9UEU0 232 aa18.54■□□□□ 0.56
CLTA-202ENST00000345519 TBK1Q9UHD2 729 aa18.54■□□□□ 0.56
CLTA-202ENST00000345519 TRPS1Q9UHF7 1281 aa18.54■□□□□ 0.56
CLTA-202ENST00000345519 FLNBO75369 2602 aaKnown RBP18.54■□□□□ 0.56
CLTA-202ENST00000345519 UTP20O75691 2785 aaKnown RBP18.54■□□□□ 0.56
CLTA-202ENST00000345519 DOPEY2Q9Y3R5 2298 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 USP9YO00507 2555 aaPredicted RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 TRAV17A0A0B4J275 112 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 OR5H15A6NDH6 313 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 PPP6CO00743 305 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 TAC1P20366 129 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 IMPDH1P20839 514 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 PRKAA2P54646 552 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 ARG2P78540 354 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 TNFRSF17Q02223 184 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 CLCQ05315 142 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 ACTN3Q08043 901 aaPredicted RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 DDX39BQ13838 428 aaKnown RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 ELAVL1Q15717 326 aaKnown RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 MEP1AQ16819 746 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 UNC50Q53HI1 259 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 CROCCQ5TZA2 2017 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 EMBQ6PCB8 327 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 RPS27LQ71UM5 84 aaKnown RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 MYLK4Q86YV6 388 aaPredicted RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 SLC22A9Q8IVM8 553 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 RIBC1Q8N443 379 aaPredicted RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 SLC5A8Q8N695 610 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 EFCAB3Q8N7B9 438 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 CATSPER1Q8NEC5 780 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 EPS8L3Q8TE67 593 aaKnown RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 CAVIN3Q969G5 261 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 ZNF382Q96SR6 550 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 SERPINI1Q99574 410 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 KCNK13Q9HB14 408 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 SEMA4BQ9NPR2 832 aaPredicted RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 ASF1BQ9NVP2 202 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 MKS1Q9NXB0 559 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 ZNF223Q9UK11 482 aaPredicted RBP18.53■□□□□ 0.56
CLTA-202ENST00000345519 ADAM29Q9UKF5 820 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 ASB4Q9Y574 426 aa18.53■□□□□ 0.56
CLTA-202ENST00000345519 ESPNB1AK53 854 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 G3V2L1 256 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 GOLGA8RI6L899 631 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 CRHR1P34998 444 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 HNRNPH2P55795 449 aaKnown RBP18.52■□□□□ 0.56
CLTA-202ENST00000345519 SLC18A2Q05940 514 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 ZNF33BQ06732 778 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 SRSF1Q07955 248 aaKnown RBP eCLIP18.52■□□□□ 0.569e-11■■□□□ 11.8
CLTA-202ENST00000345519 SLC13A2Q13183 592 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 ZNF324BQ6AW86 544 aaPredicted RBP18.52■□□□□ 0.56
CLTA-202ENST00000345519 BEST3Q8N1M1 668 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 KIF2BQ8N4N8 673 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 MDS2Q8NDY4 140 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 ANKRD9Q96BM1 317 aaPredicted RBP18.52■□□□□ 0.56
CLTA-202ENST00000345519 C19orf60Q96EN9 201 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 SORBS1Q9BX66 1292 aaKnown RBP18.52■□□□□ 0.56
CLTA-202ENST00000345519 BRF2Q9HAW0 419 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 PHF11Q9UIL8 331 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 SPACA6W5XKT8 324 aa18.52■□□□□ 0.56
CLTA-202ENST00000345519 TCP11X1B4DZS4 312 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 SAP18O00422 153 aaKnown RBP18.51■□□□□ 0.55
CLTA-202ENST00000345519 PROM1O43490 865 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 TMPRSS11DO60235 418 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 MAN1A2O60476 641 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 PROCP04070 461 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 PPP2R1BP30154 601 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 NEK2P51955 445 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 RAP1GDS1P52306 607 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 CDH13P55290 713 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 TAS2R50P59544 299 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 BIKQ13323 160 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 SERTAD2Q14140 314 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 MILR1Q7Z6M3 343 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 NUDT13Q86X67 352 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 MREGQ8N565 214 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 ATP6V1E2Q96A05 226 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 CCDC126Q96EE4 140 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 VMP1Q96GC9 406 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 SLX1AQ9BQ83 275 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 SLC29A3Q9BZD2 475 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 LYARQ9NX58 379 aaKnown RBP18.51■□□□□ 0.55
CLTA-202ENST00000345519 PLA2G3Q9NZ20 509 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 STMN3Q9NZ72 180 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 LGALS13Q9UHV8 139 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 STK38LQ9Y2H1 464 aa18.51■□□□□ 0.55
CLTA-202ENST00000345519 VPS4BO75351 444 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 EEDO75530 441 aaKnown RBP18.5■□□□□ 0.55
CLTA-202ENST00000345519 MYO1DO94832 1006 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 CBX6O95503 412 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 TRHRP34981 398 aaPredicted RBP18.5■□□□□ 0.55
CLTA-202ENST00000345519 SLCO1A2P46721 670 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 UQCRFS1P47985 274 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 NAA20P61599 178 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 SLAMF1Q13291 335 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 TUBA3CQ13748 450 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 CCDC153Q494R4 210 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 TUBA3EQ6PEY2 450 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 ZYG11AQ6WRX3 759 aa18.5■□□□□ 0.55
CLTA-202ENST00000345519 GPR180Q86V85 440 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms