RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 POU2F2P09086 479 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 ARAFP10398 606 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 ERGP11308 486 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 DDCP20711 480 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 C21orf33P30042 268 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-201ENST00000343916 PCBP3P57721 371 aaKnown RBP18.44■□□□□ 0.54
COL9A3-201ENST00000343916 DSTNP60981 165 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 MVKQ03426 396 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 ITGADQ13349 1161 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 CCDC103Q8IW40 242 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 FAM20CQ8IXL6 584 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 C7orf61Q8IZ16 206 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 ZNF347Q96SE7 839 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 AIF1LQ9BQI0 150 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 NLNQ9BYT8 704 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 LHX9Q9NQ69 397 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 TSC22D4Q9Y3Q8 395 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 COL4A3Q01955 1670 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 DENND4AQ7Z401 1863 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 ALPK3Q96L96 1907 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 KRT75O95678 551 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 STATHP02808 62 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 ACP5P13686 325 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 MANFP55145 182 aaKnown RBP18.44■□□□□ 0.54
COL9A3-201ENST00000343916 MICAQ29983 383 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 SYT6Q5T7P8 510 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-201ENST00000343916 CCDC80Q76M96 950 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 HORMAD2Q8N7B1 307 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 AMER3Q8N944 861 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 PROX1Q92786 737 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 RAB7BQ96AH8 199 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 XKR8Q9H6D3 395 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 EPS8L2Q9H6S3 715 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 TRNAU1APQ9NX07 287 aaKnown RBP18.44■□□□□ 0.54
COL9A3-201ENST00000343916 AHSPQ9NZD4 102 aa18.44■□□□□ 0.54
COL9A3-201ENST00000343916 PAIP2BQ9ULR5 123 aaKnown RBP18.44■□□□□ 0.54
COL9A3-201ENST00000343916 RECKO95980 971 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 BCHEP06276 602 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 SLC35G4P0C7Q5 338 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 UQCRC2P22695 453 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 TGFBR1P36897 503 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 SLC19A1P41440 591 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 DGKEP52429 567 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 NUDT6P53370 316 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 RUNX3Q13761 415 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 PRSS48Q7RTY5 328 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 ADCK2Q7Z695 626 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 P2RY8Q86VZ1 359 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 UTP15Q8TED0 518 aaKnown RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 CHPT1Q8WUD6 406 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 GEMIN6Q8WXD5 167 aaKnown RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 RAB8BQ92930 207 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 GTPBP3Q969Y2 492 aaKnown RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 EXOSC8Q96B26 276 aaKnown RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 YIPF6Q96EC8 236 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 PLA2G2FQ9BZM2 168 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 RHBGQ9H310 441 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 THSD1Q9NS62 852 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 ACER3Q9NUN7 267 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 TEX10Q9NXF1 929 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 SLC6A14Q9UN76 642 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 ICKQ9UPZ9 632 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 ANGPT4Q9Y264 503 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 A0A1W2PP55 124 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 TRBC2A0A5B9 178 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 OR1F1O43749 312 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 TMPRSS11DO60235 418 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 LCMT2O60294 686 aaKnown RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 SERPINB7O75635 380 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 SERPIND1P05546 499 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 GGT2P36268 569 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 OPRL1P41146 370 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 RXRGP48443 463 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 CCR8P51685 355 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 RPL3LQ92901 407 aaKnown RBP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 PRDM8Q9NQV8 689 aa18.43■□□□□ 0.54
COL9A3-201ENST00000343916 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL9A3-201ENST00000343916 WASHC1A8K0Z3 465 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 FAM227AF5H4B4 570 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SCAMP1O15126 338 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SULT1C4O75897 302 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 XCR1P46094 333 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 ST13P50502 369 aaKnown RBP18.42■□□□□ 0.54
COL9A3-201ENST00000343916 NCS1P62166 190 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 OCA2Q04671 838 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 WASH2PQ6VEQ5 465 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 BTLAQ7Z6A9 289 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 IGFN1Q86VF2 1251 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 KIAA1958Q8N8K9 716 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 SLC38A5Q8WUX1 472 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 TRUB1Q8WWH5 349 aaKnown RBP18.42■□□□□ 0.54
COL9A3-201ENST00000343916 C12orf66Q96MD2 445 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 RSPO3Q9BXY4 272 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-201ENST00000343916 ALOXE3Q9BYJ1 711 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 CCNB1IP1Q9NPC3 277 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 PCDHGA2Q9Y5H1 932 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 CAPN5O15484 640 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-201ENST00000343916 B4GALT2O60909 372 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 ITGA2P17301 1181 aa18.42■□□□□ 0.54
COL9A3-201ENST00000343916 FGL2Q14314 439 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms