RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 DMAC2Q9NW81 257 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 ARHGAP23Q9P227 1491 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 HMX3A6NHT5 357 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 BEST1O76090 585 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 MAP2K3P46734 347 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 ZNF45Q02386 682 aa11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 DPH2Q9BQC3 489 aaPredicted RBP11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 SRA1Q9HD15 236 aaKnown RBP11.71□□□□□ -0.53
SEMA6A-202ENST00000343348 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 PCDH17O14917 1159 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 ADH5P11766 374 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 MOGSQ13724 837 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 RBM39Q14498 530 aaKnown RBP11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 AGTRAPQ6RW13 159 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 LMX1AQ8TE12 382 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 RAD9AQ99638 391 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 DERL2Q9GZP9 239 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 GON4LQ3T8J9 2241 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 FMO6PO60774 539 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 GABRA3P34903 492 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 HSD17B2P37059 387 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 LEPRP48357 1165 aaKnown RBP11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 BLKP51451 505 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 HYAL4Q2M3T9 481 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 LRFN4Q6PJG9 635 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 WASF3Q9UPY6 502 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.54
SEMA6A-202ENST00000343348 ATRNO75882 1429 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 AGXTP21549 392 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 MAPK3P27361 379 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ABHD18Q0P651 414 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 FBXL12Q9NXK8 326 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 SEC14L4Q9UDX3 406 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 GJD2Q9UKL4 321 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 A0A0D9SEW6 157 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 B8ZZF3 427 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 H0YJX3 145 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ANXA3P12429 323 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 RPS26P62854 115 aaKnown RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 EMX2Q04743 252 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ADGRF1Q5T601 910 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 GRHL2Q6ISB3 625 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 FAM180BQ6P0A1 224 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 PEBP4Q96S96 227 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 OR8D2Q9GZM6 311 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 FAM120CQ9NX05 1096 aaKnown RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 IL20RAQ9UHF4 553 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 H7BY64 318 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 HOXA10P31260 410 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 RAB4BP61018 213 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 GNMTQ14749 295 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ZNF181Q2M3W8 571 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 CTC1Q2NKJ3 1217 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 PRRT3Q5FWE3 981 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 TMEM225Q6GV28 225 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 REEP3Q6NUK4 255 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 KIF18BQ86Y91 864 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 SCML4Q8N228 414 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 PRAP1Q96NZ9 151 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 NELL2Q99435 816 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 CCDC106Q9BWC9 280 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 TMEM184CQ9NVA4 438 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 GMEB2Q9UKD1 530 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 CLEC3AO75596 197 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 POLR2CP19387 275 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 AMY2BP19961 511 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 TRAM2Q15035 370 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 SLC36A3Q495N2 470 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ZNF367Q7RTV3 350 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 TREML1Q86YW5 311 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 MMP27Q9H306 513 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ATPIF1Q9UII2 106 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 MGAT4BQ9UQ53 548 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 B3GALT1Q9Y5Z6 326 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 WNT6Q9Y6F9 365 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 FEZF1A0PJY2 475 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ZNF850A8MQ14 1090 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 GPR4P46093 362 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 DHPSP49366 369 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 BEST3Q8N1M1 668 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 ZSCAN4Q8NAM6 433 aaPredicted RBP11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 OR56A1Q8NGH5 318 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 RPLP0P6Q8NHW5 317 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 TUBA1CQ9BQE3 449 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 SYT4Q9H2B2 425 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 PCDHB3Q9Y5E6 796 aa11.7□□□□□ -0.54
SEMA6A-202ENST00000343348 A0A0U1RQK1 487 aa11.69□□□□□ -0.54
SEMA6A-202ENST00000343348 PRSS51A0A1B0GVH4 220 aa11.69□□□□□ -0.54
SEMA6A-202ENST00000343348 TMEM88BA6NKF7 163 aa11.69□□□□□ -0.54
SEMA6A-202ENST00000343348 SOX30O94993 753 aa11.69□□□□□ -0.54
SEMA6A-202ENST00000343348 H2BFMP0C1H6 154 aa11.69□□□□□ -0.54
SEMA6A-202ENST00000343348 FGF3P11487 239 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms