RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC26A5P58743 744 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 CUL3Q13618 768 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 BTBD16Q32M84 506 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 FRG2Q64ET8 278 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 B3GNTL1Q67FW5 361 aaPredicted RBP14.42□□□□□ -0.1
VAPA-201ENST00000340541 OR4C11Q6IEV9 310 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 H3F3CQ6NXT2 135 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 LINC00696Q6ZRV3 163 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 MAMDC2Q7Z304 686 aaPredicted RBP14.42□□□□□ -0.1
VAPA-201ENST00000340541 MILR1Q7Z6M3 343 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 M1APQ8TC57 530 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 PPP4R1Q8TF05 950 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 RGMAQ96B86 450 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 L3HYPDHQ96EM0 354 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 FRG2BQ96QU4 278 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 LPAR4Q99677 370 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 MMP25Q9NPA2 562 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 PRTFDC1Q9NRG1 225 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 AGPAT4Q9NRZ5 378 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 RAB21Q9UL25 225 aa14.42□□□□□ -0.1
VAPA-201ENST00000340541 PLIN3O60664 434 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 SUPT7LO94864 414 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 OTCP00480 354 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 LDLRP01130 860 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 KRT4P19013 534 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 CRHR1P34998 444 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 BSGP35613 385 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 SSR2P43308 183 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 TSFMP43897 325 aaKnown RBP14.41□□□□□ -0.1
VAPA-201ENST00000340541 CLCQ05315 142 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 SLC18A2Q05940 514 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 ELOAQ14241 798 aaKnown RBP14.41□□□□□ -0.1
VAPA-201ENST00000340541 NR6A1Q15406 480 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 EXT1Q16394 746 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 AP5B1Q2VPB7 878 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 ZYG11AQ6WRX3 759 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 CUZD1Q86UP6 607 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 ZNF595Q8IYB9 648 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 ZCCHC7Q8N3Z6 543 aaKnown RBP14.41□□□□□ -0.1
VAPA-201ENST00000340541 MREGQ8N565 214 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 NFAM1Q8NET5 270 aaPredicted RBP14.41□□□□□ -0.1
VAPA-201ENST00000340541 TRPC4APQ8TEL6 797 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 NPAS2Q99743 824 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 C12orf65Q9H3J6 166 aaKnown RBP14.41□□□□□ -0.1
VAPA-201ENST00000340541 LGALS13Q9UHV8 139 aa14.41□□□□□ -0.1
VAPA-201ENST00000340541 DOPEY1Q5JWR5 2465 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 TLDC2A0PJX2 215 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 ANKUB1A6NFN9 424 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 SAGE2PA6NJ88 616 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 EEDO75530 441 aaKnown RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 OR4F21O95013 312 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 PPP2R1BP30154 601 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 ARL1P40616 181 aaPredicted RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 AP2B1P63010 937 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 PHEXP78562 749 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 ACTN3Q08043 901 aaPredicted RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 SLAMF1Q13291 335 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 C10orf62Q5T681 223 aaPredicted RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 MRM1Q6IN84 353 aaKnown RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 SLC22A9Q8IVM8 553 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 C4orf33Q8N1A6 199 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 RIBC1Q8N443 379 aaPredicted RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 MYRIPQ8NFW9 859 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 ELP5Q8TE02 316 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 MTFMTQ96DP5 389 aaKnown RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 C5orf34Q96MH7 638 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 GSTO2Q9H4Y5 243 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 EPS8L2Q9H6S3 715 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 DDX31Q9H8H2 851 aaKnown RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 FARSBQ9NSD9 589 aaKnown RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 TRPS1Q9UHF7 1281 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 ERRFI1Q9UJM3 462 aaPredicted RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 GRID1Q9ULK0 1009 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 MRPS33Q9Y291 106 aaKnown RBP14.4□□□□□ -0.1
VAPA-201ENST00000340541 PCDHGA10Q9Y5H3 936 aa14.4□□□□□ -0.1
VAPA-201ENST00000340541 NBPF19A0A087WUL8 3843 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 A0A0A6YYD5 115 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CLDN4O14493 209 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 TMPRSS11DO60235 418 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CTNSO60931 367 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 SEMA3DO95025 777 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 RNF224P0DH78 156 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CCT5P48643 541 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 RAP1GDS1P52306 607 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 HNRNPH2P55795 449 aaKnown RBP14.39□□□□□ -0.11
VAPA-201ENST00000340541 SLC13A2Q13183 592 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 RCN2Q14257 317 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CCDC153Q494R4 210 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 HIST2H2BCQ6DN03 193 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CLNKQ7Z7G1 428 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 TRABD2AQ86V40 505 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 KIF2BQ8N4N8 673 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 ST6GALNAC3Q8NDV1 305 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CATSPER1Q8NEC5 780 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 MAGEB10Q96LZ2 347 aaPredicted RBP14.39□□□□□ -0.11
VAPA-201ENST00000340541 ZNF382Q96SR6 550 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 SERPINI1Q99574 410 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 CENPKQ9BS16 269 aa14.39□□□□□ -0.11
VAPA-201ENST00000340541 PRM3Q9NNZ6 103 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms