RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ZNF226Q9NYT6 803 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 GSTK1Q9Y2Q3 226 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ARHGEF33A8MVX0 844 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 YES1P07947 543 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 MAGEA11P43364 429 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 MAN2A2P49641 1150 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 CTSCP53634 463 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 DSTNP60981 165 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 CSNK2BP67870 215 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 IFITM2Q01629 132 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 FBXO43Q4G163 708 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 COMMD6Q7Z4G1 85 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 IQCHQ86VS3 1027 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 OR6C4Q8NGE1 309 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 USP7Q93009 1102 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ZFP3Q96NJ6 502 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 CD8B2A6NJW9 211 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 SGTAO43765 313 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 PRAMEF4O60810 478 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 CD8BP10966 210 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 AVPR1BP47901 424 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 CCT3P49368 545 aaKnown RBP13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
PCDH8-201ENST00000338862 GINS1Q14691 196 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ZNF697Q5TEC3 545 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 PRAMEF9Q5VWM5 478 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 FRMPD2BQ6IN97 320 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 ABI3BPQ7Z7G0 1075 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 AMIGO1Q86WK6 493 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 GEMIN6Q8WXD5 167 aaKnown RBP13.53□□□□□ -0.24
PCDH8-201ENST00000338862 PIP5K1AQ99755 562 aa13.53□□□□□ -0.24
PCDH8-201ENST00000338862 MRPL17Q9NRX2 175 aaKnown RBP13.53□□□□□ -0.24
PCDH8-201ENST00000338862 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 CPSF4LA6NMK7 179 aaKnown RBP13.52□□□□□ -0.24
PCDH8-201ENST00000338862 LRG1P02750 347 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.24
PCDH8-201ENST00000338862 MAPK12P53778 367 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 CCDC58Q4VC31 144 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 LYPLAL1Q5VWZ2 237 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 OR5D16Q8NGK9 328 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 TRIM63Q969Q1 353 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 ARSGQ96EG1 525 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 FCRL4Q96PJ5 515 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 ZIC5Q96T25 663 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 HSPE1-MOB4S4R3N1 261 aa13.52□□□□□ -0.24
PCDH8-201ENST00000338862 EOMESO95936 686 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 ELFN1P0C7U0 828 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 HTR3AP46098 478 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF385BQ569K4 471 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 PLAG1Q6DJT9 500 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 NLRP8Q86W28 1048 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 FAM20CQ8IXL6 584 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 Q8N402 240 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 PLD4Q96BZ4 506 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 TMEM80Q96HE8 168 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 BBS4Q96RK4 519 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 NRTNQ99748 197 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 SPG21Q9NZD8 308 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 MAT2BQ9NZL9 334 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 WASHC1A8K0Z3 465 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 H3BSH0 61 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 AKR7A2O43488 359 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 LHCGRP22888 699 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 PPIBP23284 216 aaKnown RBP13.52□□□□□ -0.25
PCDH8-201ENST00000338862 ACLYP53396 1101 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 PTSQ03393 145 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 LCN1P1Q5VSP4 162 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 IL20RBQ6UXL0 311 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 WASH2PQ6VEQ5 465 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 WDR53Q7Z5U6 358 aaPredicted RBP13.52□□□□□ -0.25
PCDH8-201ENST00000338862 CDH24Q86UP0 819 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 MARCH9Q86YJ5 346 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 TP53I13Q8NBR0 393 aaPredicted RBP13.52□□□□□ -0.25
PCDH8-201ENST00000338862 DNAJB8Q8NHS0 232 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 SLC12A9Q9BXP2 914 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 QRSL1Q9H0R6 528 aaKnown RBP13.52□□□□□ -0.25
PCDH8-201ENST00000338862 C11orf54Q9H0W9 315 aaPredicted RBP13.52□□□□□ -0.25
PCDH8-201ENST00000338862 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 CORO2BQ9UQ03 480 aa13.52□□□□□ -0.25
PCDH8-201ENST00000338862 FEZF1A0PJY2 475 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 INPPL1O15357 1258 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 HOXC11O43248 304 aaPredicted RBP13.51□□□□□ -0.25
PCDH8-201ENST00000338862 GPX2P18283 190 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 UQCRC1P31930 480 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 IFNA8P32881 189 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 SLC35F1Q5T1Q4 408 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF438Q7Z4V0 828 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 ZNF557Q8N988 423 aaPredicted RBP13.51□□□□□ -0.25
PCDH8-201ENST00000338862 SAMD11Q96NU1 681 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 SPRTNQ9H040 489 aaPredicted RBP13.51□□□□□ -0.25
PCDH8-201ENST00000338862 ANKRA2Q9H9E1 313 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 GULP1Q9UBP9 304 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 SBF1O95248 1867 aa13.51□□□□□ -0.25
PCDH8-201ENST00000338862 ALDH1A1P00352 501 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms