RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 SEMA3GQ9NS98 782 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TEX10Q9NXF1 929 aaPredicted RBP9.26□□□□□ -0.93
MSL3-202ENST00000337339 SAGE1Q9NXZ1 904 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 DNAJC27Q9NZQ0 273 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 CKAP5Q14008 2032 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 CARNS1A5YM72 827 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 GASTP01350 101 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 DNTTP04053 509 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 CKMT1AP12532 417 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 GADD45AP24522 165 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
MSL3-202ENST00000337339 CDC42P60953 191 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TARDBPQ13148 414 aaKnown RBP eCLIP9.26□□□□□ -0.93
MSL3-202ENST00000337339 ZNF846Q147U1 533 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 ZC3H12BQ5HYM0 836 aaKnown RBP9.26□□□□□ -0.93
MSL3-202ENST00000337339 COLEC12Q5KU26 742 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 DCDC5Q6ZRR9 648 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 RNF165Q6ZSG1 346 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 SLC9B2Q86UD5 537 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 ANKRD13BQ86YJ7 626 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 NRSN1Q8IZ57 195 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
MSL3-202ENST00000337339 OR2L2Q8NH16 312 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 WDR36Q8NI36 951 aaKnown RBP9.26□□□□□ -0.93
MSL3-202ENST00000337339 WFIKKN2Q8TEU8 576 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 KXD1Q9BQD3 176 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 PRR14Q9BWN1 585 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 EYSQ5T1H1 3165 aa9.26□□□□□ -0.93
MSL3-202ENST00000337339 GBF1Q92538 1859 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ISM1B1AKI9 464 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 SLC22A1O15245 554 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 TBX1O43435 398 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ANXA8P13928 327 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 TPP2P29144 1249 aaPredicted RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 CD6P30203 668 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 RFX3P48380 749 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 CCT3P49368 545 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 CCR8P51685 355 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 CRISP3P54108 245 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 GPM6BQ13491 265 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 CAMK1Q14012 370 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 PTGES3Q15185 160 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 MICAQ29983 383 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 WSCD2Q2TBF2 565 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 GPAT3Q53EU6 434 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ARMCX4Q5H9R4 360 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 KHDRBS2Q5VWX1 349 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 TANGO2Q6ICL3 276 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 REEP3Q6NUK4 255 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 SLC34A3Q8N130 599 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ANKRD53Q8N9V6 530 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 SLC38A5Q8WUX1 472 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 GEMIN6Q8WXD5 167 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 ARMC5Q96C12 935 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 QRSL1Q9H0R6 528 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 OR51E2Q9H255 320 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 C1GALT1Q9NS00 363 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 SLC13A4Q9UKG4 626 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 PLXNA4Q9HCM2 1894 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 NOTCH4Q99466 2003 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 TRPM6Q9BX84 2022 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 CCDC88CQ9P219 2028 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 SMIM30A4D0T7 59 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ANHXE9PGG2 379 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 M0R3H8 397 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 SPINT1O43278 529 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ERI3O43414 337 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 FUCA1P04066 466 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 HOXB9P17482 250 aaPredicted RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 ALOX12P18054 663 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 CDH3P22223 829 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 CNR2P34972 360 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 RPL3P39023 403 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 CDK3Q00526 305 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ALDH6A1Q02252 535 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 SLC13A2Q13183 592 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 LASP1Q14847 261 aaKnown RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 SYPL1Q16563 259 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 TBC1D25Q3MII6 688 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 FAM71E1Q6IPT2 247 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 DHRS4L2Q6PKH6 230 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 FAM43BQ6ZT52 329 aaPredicted RBP9.25□□□□□ -0.93
MSL3-202ENST00000337339 ARMC8Q8IUR7 673 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 GPR65Q8IYL9 337 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 METTL4Q8N3J2 472 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 IQCF1Q8N6M8 205 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 OR8K5Q8NH50 307 aa9.25□□□□□ -0.93
MSL3-202ENST00000337339 ZNF675Q8TD23 568 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms