RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 AP2B1P63010 937 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 ID2Q02363 134 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 TGM3Q08188 693 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 SLAMF1Q13291 335 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 AP5B1Q2VPB7 878 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 UNC50Q53HI1 259 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 ZNF468Q5VIY5 522 aaPredicted RBP13.94□□□□□ -0.18
KATNA1-201ENST00000335643 C18orf63Q68DL7 685 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 SRFBP1Q8NEF9 429 aaKnown RBP13.94□□□□□ -0.18
KATNA1-201ENST00000335643 OR2W6PQ8NHA6 318 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 ADAMTS18Q8TE60 1221 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 GRHL3Q8TE85 626 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 UCN3Q969E3 161 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 HES7Q9BYE0 225 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 RNF32Q9H0A6 362 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
KATNA1-201ENST00000335643 ADGRE2Q9UHX3 823 aa13.94□□□□□ -0.18
KATNA1-201ENST00000335643 RP1L1Q8IWN7 2480 aaPredicted RBP13.94□□□□□ -0.18
KATNA1-201ENST00000335643 PRKNO60260 465 aaPredicted RBP13.93□□□□□ -0.18
KATNA1-201ENST00000335643 CTNSO60931 367 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 CBX6O95503 412 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 GBAP04062 536 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 RAP1GDS1P52306 607 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 TUBA3CQ13748 450 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 EIF2S3LQ2VIR3 472 aaKnown RBP13.93□□□□□ -0.18
KATNA1-201ENST00000335643 TCHHL1Q5QJ38 904 aaPredicted RBP13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 TUBA3EQ6PEY2 450 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 OR4N5Q8IXE1 308 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ZNF321PQ8N8H1 164 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ACMSDQ8TDX5 336 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 TRPC4APQ8TEL6 797 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 RGMAQ96B86 450 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ANKRD9Q96BM1 317 aaPredicted RBP13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ZNF354BQ96LW1 612 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ROGDIQ9GZN7 287 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.93□□□□□ -0.18
KATNA1-201ENST00000335643 CDCP1Q9H5V8 836 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 MRPS33Q9Y291 106 aaKnown RBP13.93□□□□□ -0.18
KATNA1-201ENST00000335643 ATG4BQ9Y4P1 393 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 PTPN13Q12923 2485 aa13.93□□□□□ -0.18
KATNA1-201ENST00000335643 A0A0A6YYD5 115 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 TRAV17A0A0B4J275 112 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 GABRR3A8MPY1 467 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 FOXE1O00358 373 aaPredicted RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 CLDN4O14493 209 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 FGF17O60258 216 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 CPN2P22792 545 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 PTX3P26022 381 aaPredicted RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 CD96P40200 585 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 HERVK_113P63132 956 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 CLCQ05315 142 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 CUL3Q13618 768 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 MEP1AQ16819 746 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 GGTA1PQ4G0N0 100 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 FRG2Q64ET8 278 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 MRM1Q6IN84 353 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 DGAT2L6Q6ZPD8 337 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 MILR1Q7Z6M3 343 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ZCCHC7Q8N3Z6 543 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 MDS2Q8NDY4 140 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ARMC2Q8NEN0 867 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 B3GNT7Q8NFL0 401 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 PTPMT1Q8WUK0 201 aaPredicted RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 SREK1Q8WXA9 508 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 NCLNQ969V3 563 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 REPS1Q96D71 796 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 FRG2BQ96QU4 278 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 HBEGFQ99075 208 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 CCDC77Q9BR77 488 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ERVK-6Q9BXR3 956 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 MRPL1Q9BYD6 325 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ALOXE3Q9BYJ1 711 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 TEKT2Q9UIF3 430 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 PPIEQ9UNP9 301 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ASB4Q9Y574 426 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 TRBV11-1A0A0K0K1C0 115 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 G3V2L1 256 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 WISP2O76076 250 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 SUPT7LO94864 414 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 OR4F21O95013 312 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 RNF224P0DH78 156 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 TPP2P29144 1249 aaPredicted RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 PMP22Q01453 160 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 SGO1Q5FBB7 561 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 SPINK14Q6IE38 97 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 RPUSD3Q6P087 351 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 C16orf47Q6ZP98 133 aaPredicted RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 LCA5Q86VQ0 697 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 RPS19BP1Q86WX3 136 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ZNF227Q86WZ6 799 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 TDRPQ86YL5 185 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 SLC5A8Q8N695 610 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.92□□□□□ -0.182e-8■■■■■ 72.2
KATNA1-201ENST00000335643 DDX31Q9H8H2 851 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 LIN28AQ9H9Z2 209 aaKnown RBP13.92□□□□□ -0.18
KATNA1-201ENST00000335643 ADAP2Q9NPF8 381 aa13.92□□□□□ -0.18
KATNA1-201ENST00000335643 PSD3Q9NYI0 1048 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms