RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ROGDIQ9GZN7 287 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 ACER3Q9NUN7 267 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 KLHL20Q9Y2M5 609 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 FAM32AQ9Y421 112 aaKnown RBP18.03■□□□□ 0.48
RFTN1-201ENST00000334133 GABARAPO95166 117 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 MAT2AP31153 395 aaKnown RBP18.03■□□□□ 0.48
RFTN1-201ENST00000334133 GJA4P35212 333 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 MICAQ29983 383 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 SOWAHCQ53LP3 525 aaPredicted RBP18.03■□□□□ 0.48
RFTN1-201ENST00000334133 LCTLQ6UWM7 567 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 Q6ZNX1 250 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 CACTIN-AS1Q8N1I8 211 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 OR4C15Q8NGM1 316 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 OR5K2Q8NHB8 316 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 SLC38A5Q8WUX1 472 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 YIPF6Q96EC8 236 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 COX14Q96I36 57 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 C12orf66Q96MD2 445 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 PLA2G2FQ9BZM2 168 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 MAPRE3Q9UPY8 281 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 C2orf16Q68DN1 1984 aa18.03■□□□□ 0.48
RFTN1-201ENST00000334133 NME6O75414 186 aaPredicted RBP18.02■□□□□ 0.48
RFTN1-201ENST00000334133 RECKO95980 971 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 IGFBP1P08833 259 aaPredicted RBP18.02■□□□□ 0.48
RFTN1-201ENST00000334133 STSP08842 583 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 SLC35G4P0C7Q5 338 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 EN2P19622 333 aaPredicted RBP18.02■□□□□ 0.48
RFTN1-201ENST00000334133 LIPAP38571 399 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 CRISP3P54108 245 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 PUM1Q14671 1186 aaKnown RBP eCLIP18.02■□□□□ 0.48
RFTN1-201ENST00000334133 UNC5DQ6UXZ4 953 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 GANCQ8TET4 914 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 SETD7Q8WTS6 366 aaKnown RBP18.02■□□□□ 0.48
RFTN1-201ENST00000334133 SH3YL1Q96HL8 342 aaPredicted RBP18.02■□□□□ 0.48
RFTN1-201ENST00000334133 PITX2Q99697 317 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 C17orf62Q9BQA9 187 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 FZD3Q9NPG1 666 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 LHX9Q9NQ69 397 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 PCDHGB1Q9Y5G3 927 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 HSPE1-MOB4S4R3N1 261 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 PMF1-BGLAPU3KQ54 211 aa18.02■□□□□ 0.48
RFTN1-201ENST00000334133 KAT7O95251 611 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 GADD45GO95257 159 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 BSGP35613 385 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 FEN1P39748 380 aaKnown RBP18.02■□□□□ 0.47
RFTN1-201ENST00000334133 PSRC1Q6PGN9 363 aaPredicted RBP18.02■□□□□ 0.47
RFTN1-201ENST00000334133 FBXO46Q6PJ61 603 aaPredicted RBP18.02■□□□□ 0.47
RFTN1-201ENST00000334133 VITQ6UXI7 678 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 AQP11Q8NBQ7 271 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 OR5D16Q8NGK9 328 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 PHF10Q8WUB8 498 aaKnown RBP18.02■□□□□ 0.47
RFTN1-201ENST00000334133 AIF1LQ9BQI0 150 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 MS4A8Q9BY19 250 aa18.02■□□□□ 0.47
RFTN1-201ENST00000334133 SNRNP200O75643 2136 aaKnown RBP18.02■□□□□ 0.47
RFTN1-201ENST00000334133 KIF26AQ9ULI4 1882 aaPredicted RBP18.01■□□□□ 0.47
RFTN1-201ENST00000334133 TPST2O60704 377 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 ARAFP10398 606 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 GGT2P36268 569 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 VASPP50552 380 aaPredicted RBP18.01■□□□□ 0.47
RFTN1-201ENST00000334133 CXCR4P61073 352 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 FADDQ13158 208 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 SYT6Q5T7P8 510 aaPredicted RBP18.01■□□□□ 0.47
RFTN1-201ENST00000334133 METRNLQ641Q3 311 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 CENPSQ8N2Z9 138 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 HDDC3Q8N4P3 179 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 UBE2E3Q969T4 207 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 KXD1Q9BQD3 176 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 YIPF4Q9BSR8 244 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 GABARAPL3Q9BY60 117 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 TMEM38AQ9H6F2 299 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 RNF167Q9H6Y7 350 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 ZNF226Q9NYT6 803 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 PCDHGA2Q9Y5H1 932 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 C5orf58C9J3I9 102 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 SOX14O95416 240 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 GASTP01350 101 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 DDCP20711 480 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 ACVR2AP27037 513 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 CCR3P51677 355 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 PRKAG1P54619 331 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 LIM2P55344 173 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 FGL2Q14314 439 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 EIF4HQ15056 248 aaKnown RBP18.01■□□□□ 0.47
RFTN1-201ENST00000334133 PDGFRLQ15198 375 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 KLHL17Q6TDP4 642 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 PRSS48Q7RTY5 328 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 GGHQ92820 318 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 TMEM19Q96HH6 336 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 INSM2Q96T92 566 aaPredicted RBP18.01■□□□□ 0.47
RFTN1-201ENST00000334133 TMEM106CQ9BVX2 250 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 ANGPT4Q9Y264 503 aa18.01■□□□□ 0.47
RFTN1-201ENST00000334133 A0A1W2PPV9 198 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 SOBPA7XYQ1 873 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 KRT75O95678 551 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 HSMCR30P0CW71 290 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 UBE3AQ05086 875 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 ZNF630Q2M218 657 aaPredicted RBP18■□□□□ 0.47
RFTN1-201ENST00000334133 ZNF750Q32MQ0 723 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 DSG4Q86SJ6 1040 aa18■□□□□ 0.47
RFTN1-201ENST00000334133 ADCK1Q86TW2 530 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms