RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 HLA-DQB2P05538 268 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ITGB5P18084 799 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CHRNA5P30532 468 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NSG1P42857 185 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 BRCC3P46736 316 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CELF3Q5SZQ8 465 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FAM171BQ6P995 826 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 TRAPPC5Q8IUR0 188 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ARL14Q8N4G2 192 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SLC28A3Q9HAS3 691 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 WASH6PQ9NQA3 447 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 HSFX1Q9UBD0 423 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 A3GALT2U3KPV4 340 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 E7EQ34 232 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 GOSR2O14653 212 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NKRFO15226 690 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 LRRTM2O43300 516 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SC5DO75845 299 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 LCKP06239 509 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 HCAR3P49019 387 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CAPZA1P52907 286 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ITPK1Q13572 414 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ABCA11PQ4W5N1 156 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 WDR53Q7Z5U6 358 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ADAMTS19Q8TE59 1207 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 COL26A1Q96A83 441 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PYCR2Q96C36 320 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OSMRQ99650 979 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CACNG6Q9BXT2 260 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NLGN3Q9NZ94 848 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FNIP2Q9P278 1114 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 VPS29Q9UBQ0 182 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FNDC1Q4ZHG4 1894 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 A0A075B6Q4 140 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SULT1C2O00338 296 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FAAHO00519 579 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FLRT2O43155 660 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SEPT4O43236 478 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CYP2B6P20813 491 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 HK3P52790 923 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CTXN3Q4LDR2 81 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ATCAYQ86WG3 371 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OR2L2Q8NH16 312 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 RBPMSQ93062 196 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 EIF5A2Q9GZV4 153 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 DPEP3Q9H4B8 488 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PCDHB5Q9Y5E4 795 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 F5H0A9 414 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SDC3O75056 442 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CHRM5P08912 532 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CAPN3P20807 821 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CERS1P27544 350 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 BAG6P46379 1132 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ACTBP60709 375 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 RAP2BP61225 183 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ACTG1P63261 375 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ACTC1P68032 377 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ACTA1P68133 377 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 LAPTM4AQ15012 233 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 TCEA2Q15560 299 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 KLHL26Q53HC5 615 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 TOR2AQ5JU69 321 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 AGMOQ6ZNB7 445 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ADGRG5Q8IZF4 528 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OR10Q1Q8NGQ4 319 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 OR6K6Q8NGW6 343 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 LMO3Q8TAP4 145 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SMAP2Q8WU79 429 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NTAN1Q96AB6 310 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ELP4Q96EB1 424 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PPP1R16AQ96I34 528 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SENP8Q96LD8 212 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF578Q96N58 590 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 B3GNT4Q9C0J1 378 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 H3BRB1 525 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 GATCO43716 136 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 VAMP1P23763 118 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SLC35F1Q5T1Q4 408 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 MED27Q6P2C8 311 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 FCRL5Q96RD9 977 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PEBP4Q96S96 227 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 STRA6Q9BX79 667 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 BRINP2Q9C0B6 783 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CIPCQ9C0C6 399 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 CDT1Q9H211 546 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 DCAF13Q9NV06 445 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 RBFOX1Q9NWB1 397 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 TEX10Q9NXF1 929 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 GNG8Q9UK08 70 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 STK25O00506 426 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 STSP08842 583 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 ZNF26P17031 533 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SSTR4P31391 388 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 GGT2P36268 569 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 HSPB3Q12988 150 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 NOMO2Q5JPE7 1267 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SLC27A4Q6P1M0 643 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 PAPD4Q6PIY7 484 aaKnown RBP6.8□□□□□ -1.32
SMC1A-201ENST00000322213 SLAIN1Q8ND83 568 aa6.8□□□□□ -1.32
SMC1A-201ENST00000322213 B3GNT7Q8NFL0 401 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms