RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 PI15O43692 258 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 XCR1P46094 333 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 EEF1A2Q05639 463 aaKnown RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 PDE7AQ13946 482 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 DEF8Q6ZN54 512 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 ADCK2Q7Z695 626 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 RBM45Q8IUH3 476 aaKnown RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 LRRC56Q8IYG6 542 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 DEPDC4Q8N2C3 294 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 TFGQ92734 400 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 HPS1Q92902 700 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 LRIG1Q96JA1 1093 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 TMEM38AQ9H6F2 299 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 NMNAT1Q9HAN9 279 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 ENPP4Q9Y6X5 453 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 ATG2BQ96BY7 2078 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 TCF20Q9UGU0 1960 aaKnown RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 TRBV4-1A0A0J9YWV2 114 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 PLPP1O14494 284 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 DPM1O60762 260 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 DDX6P26196 483 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 GTF2E2P29084 291 aaKnown RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 CDC42P60953 191 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 KCNC4Q03721 635 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 PCDH1Q08174 1060 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 PUM1Q14671 1186 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 TBCEQ15813 527 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-201ENST00000320755 ARMC8Q8IUR7 673 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 SLC38A5Q8WUX1 472 aa16.6■□□□□ 0.25
COL9A1-201ENST00000320755 MYO9BQ13459 2157 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 ARAFP10398 606 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 IMPDH2P12268 514 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 ADRB3P13945 408 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 CHMP24386 653 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 MAPK9P45984 424 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 EPHA5P54756 1037 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 LIM2P55344 173 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 ZNF658BQ4V348 819 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-201ENST00000320755 KLHL17Q6TDP4 642 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 PLEKHG7Q6ZR37 379 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 SLC9B2Q86UD5 537 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 KLHDC8AQ8IYD2 350 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 FCGR1BQ92637 280 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 RSPRY1Q96DX4 576 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 DYRK4Q9NR20 520 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 SAGE1Q9NXZ1 904 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 DNAH14Q0VDD8 3507 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 CNOT3O75175 753 aaKnown RBP16.59■□□□□ 0.25
COL9A1-201ENST00000320755 RPLP0P05388 317 aaKnown RBP16.59■□□□□ 0.25
COL9A1-201ENST00000320755 ADRA2AP08913 450 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 CD40LGP29965 261 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 CRB2Q5IJ48 1285 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 REEP3Q6NUK4 255 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 C17orf64Q86WR6 236 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 ADGRF3Q8IZF5 1079 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 KRT78Q8N1N4 520 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 RAD51AP1Q96B01 352 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 CAB39Q9Y376 341 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-201ENST00000320755 H3BN98 237 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 FFAR1O14842 300 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 PPM1DO15297 605 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 LATO43561 262 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 KDM1AO60341 852 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 TGM1P22735 817 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 ACADLP28330 430 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 RPL3P39023 403 aaKnown RBP16.59■□□□□ 0.25
COL9A1-201ENST00000320755 BCL7AQ4VC05 210 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 SLC46A3Q7Z3Q1 461 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 FAM20CQ8IXL6 584 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 PSD4Q8NDX1 1056 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 OR8D1Q8WZ84 308 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 COL21A1Q96P44 957 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 THSD1Q9NS62 852 aa16.59■□□□□ 0.25
COL9A1-201ENST00000320755 OR10H3O60404 316 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 PCCBP05166 539 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 SRPRAP08240 638 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 PPP5CP53041 499 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 E2F2Q14209 437 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 BCDIN3DQ7Z5W3 292 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 RBM12BQ8IXT5 1001 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 GPR65Q8IYL9 337 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 ANKRD53Q8N9V6 530 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 DENND6BQ8NEG7 585 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 WDR36Q8NI36 951 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 TMEM19Q96HH6 336 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 MACROD1Q9BQ69 325 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 WFDC6Q9BQY6 131 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 EXOSC4Q9NPD3 245 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 CTPS2Q9NRF8 586 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 PLCXD1Q9NUJ7 323 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 PAIP2BQ9ULR5 123 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 DOCK9Q9BZ29 2069 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 SLC9A3R1O14745 358 aaPredicted RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 ZW10O43264 779 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 MRPS14O60783 128 aaKnown RBP16.58■□□□□ 0.24
COL9A1-201ENST00000320755 PAPLNO95428 1278 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 CKMT1AP12532 417 aa16.58■□□□□ 0.24
COL9A1-201ENST00000320755 UQCRC2P22695 453 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms